RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 DMWDQ09019 674 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SLC12A1Q13621 1099 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 TRIM25Q14258 630 aaKnown RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SQLEQ14534 574 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 GOLGA7BQ2TAP0 167 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 TBC1D25Q3MII6 688 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 COQ5Q5HYK3 327 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 MDH1BQ5I0G3 518 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SAMD4BQ5PRF9 694 aaKnown RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 LPCAT4Q643R3 524 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 LAIR1Q6GTX8 287 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 KRT80Q6KB66 452 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 FAM45BPQ6NSW5 357 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SCYL2Q6P3W7 929 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 TRMT10BQ6PF06 316 aaKnown RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 KLHDC10Q6PID8 442 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 PARM1Q6UWI2 310 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 NPNTQ6UXI9 565 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 RBM44Q6ZP01 1051 aaKnown RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 LINC00299Q6ZSB3 139 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 DENND5BQ6ZUT9 1274 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 NEK10Q6ZWH5 1172 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF554Q86TJ5 538 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SATL1Q86VE3 508 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 HPS6Q86YV9 775 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 CHERPQ8IWX8 916 aaKnown RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 DSELQ8IZU8 1212 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 CELF5Q8N6W0 485 aaKnown RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 TRIML2Q8N7C3 387 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 ANKRD52Q8NB46 1076 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 LEMD2Q8NC56 503 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 PDPRQ8NCN5 879 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 TSPAN14Q8NG11 270 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 CEP70Q8NHQ1 597 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 FAM45AQ8TCE6 357 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 ADAMTS16Q8TE57 1224 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SLC35F5Q8WV83 523 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 KBTBD7Q8WVZ9 684 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 FGF14Q92915 247 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 NTAN1Q96AB6 310 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 EME1Q96AY2 570 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 CLDN23Q96B33 292 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 ROPN1LQ96C74 230 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 CCDC124Q96CT7 223 aaKnown RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 MBD6Q96DN6 1003 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 RMND5BQ96G75 393 aaPredicted RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 MAELQ96JY0 434 aaKnown RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF560Q96MR9 790 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF778Q96MU6 729 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 CSPG4P5Q96PW8 444 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 GPR22Q99680 433 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 TUBA1CQ9BQE3 449 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SLC25A23Q9BV35 468 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 COLEC11Q9BWP8 271 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SLC2A11Q9BYW1 496 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 ANKRD60Q9BZ19 345 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 CDT1Q9H211 546 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 C12orf65Q9H3J6 166 aaKnown RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 RHOJQ9H4E5 214 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 WDR41Q9HAD4 459 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 CYP4F11Q9HBI6 524 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 PLAC1Q9HBJ0 212 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 PRMT8Q9NR22 394 aaPredicted RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 IRAK4Q9NWZ3 460 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 MARCH5Q9NX47 278 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SIX4Q9UIU6 781 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 RPS6KL1Q9Y6S9 549 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 TSC2P49815 1807 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 TRIP11Q15643 1979 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 EVPLQ92817 2033 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 DNAH14Q0VDD8 3507 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ACACBO00763 2458 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 C2orf16Q68DN1 1984 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ARHGEF37A1IGU5 675 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 HEATR9A2RTY3 570 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 TYW5A2RUC4 315 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 CAPN8A6NHC0 703 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 TRIM64CA6NLI5 447 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 AQP12BA6NM10 295 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 G3V2L1 256 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 VILLO15195 856 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 PAPSS1O43252 624 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 HNRNPRO43390 633 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ITM2AO43736 263 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 KLHL41O60662 606 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 DNAJB5O75953 348 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 PDE5AO76074 875 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 EIF2S1P05198 315 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 RETP07949 1114 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 POU2F2P09086 479 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 SPATA31D3P0C874 917 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 CXCL8P10145 99 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 MYCLP1P12525 358 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 CDH2P19022 906 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 TGM1P22735 817 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 PTX3P26022 381 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 TKTP29401 623 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 HMOX2P30519 316 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms