RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TRIM54Q9BYV2 358 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 BCL2L14Q9BZR8 327 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 SRRQ9GZT4 340 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 TASP1Q9H6P5 420 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 GTSE1Q9NYZ3 720 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 CD274Q9NZQ7 290 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 PRKAG2Q9UGJ0 569 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 INVSQ9Y283 1065 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 PCDHGA9Q9Y5G4 932 aaKnown RBP9.4□□□□□ -0.9
SIX4-202ENST00000554079 PCDHA1Q9Y5I3 950 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 KCNMB2Q9Y691 235 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 FNDC1Q4ZHG4 1894 aaPredicted RBP9.4□□□□□ -0.9
SIX4-202ENST00000554079 A0A0A6YYJ9 748 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 IGKV6D-41A0A0C4DH26 115 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 CHMP2AO43633 222 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 TULP3O75386 442 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 KATNA1O75449 491 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 ERN1O75460 977 aaKnown RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 CYP11A1P05108 521 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 MIPP30301 263 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 MTHFRP42898 656 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 KIR2DL3P43628 341 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 RARRES1P49788 294 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 EPHA5P54756 1037 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 CDH8P55286 799 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 KCNK10P57789 538 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 SSTP61278 116 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 GSTO1P78417 241 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 PCDH1Q08174 1060 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 GBX1Q14549 363 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 ZNF169Q14929 603 aaPredicted RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 TAB1Q15750 504 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 GPR19Q15760 415 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 QRICH1Q2TAL8 776 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 EML3Q32P44 896 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 SOWAHCQ53LP3 525 aaPredicted RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 SLC35F1Q5T1Q4 408 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 GPR158Q5T848 1215 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 CYHR1Q6ZMK1 362 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 LARP4Q71RC2 724 aaKnown RBP eCLIP9.39□□□□□ -0.91
SIX4-202ENST00000554079 TRILQ7L0X0 811 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 STRA8Q7Z7C7 330 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 RNF180Q86T96 592 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 IFNEQ86WN2 208 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 RASAL3Q86YV0 1011 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 MAP4K3Q8IVH8 894 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 WDTC1Q8N5D0 677 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 CAMKK1Q8N5S9 505 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 GDPD1Q8N9F7 314 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 FAM181AQ8N9Y4 354 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 TEX47Q8TBZ9 253 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 LPAR1Q92633 364 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 COPS5Q92905 334 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 RNF34Q969K3 372 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 C19orf60Q96EN9 201 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 SIPA1Q96FS4 1042 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 RNF157Q96PX1 679 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 RBM4BQ9BQ04 359 aaKnown RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 RBM4Q9BWF3 364 aaKnown RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 REG4Q9BYZ8 158 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 MS4A7Q9GZW8 240 aaPredicted RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 C11orf54Q9H0W9 315 aaPredicted RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 CCNB1IP1Q9NPC3 277 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 DDX4Q9NQI0 724 aaKnown RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 PAK6Q9NQU5 681 aaPredicted RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 AASSQ9UDR5 926 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 GLS2Q9UI32 602 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 TMEFF2Q9UIK5 374 aaPredicted RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 LIPT1Q9Y234 373 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 FIS1Q9Y3D6 152 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 PCDHB5Q9Y5E4 795 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 OAS3Q9Y6K5 1087 aaKnown RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 BRWD3Q6RI45 1802 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 THSD7AQ9UPZ6 1657 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 A0A075B6Q4 140 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 SEC14L5O43304 696 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 HRO43593 1189 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 CFBP00751 764 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 RAP2AP10114 183 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 YWHAQP27348 245 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 HTR1EP28566 365 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 PPP3CCP48454 512 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 MEOX2P50222 304 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 EEFSECP57772 596 aaKnown RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 ERVK-8P63133 956 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 MAB21L1Q13394 359 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 ANGPT1Q15389 498 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 DUSP6Q16828 381 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 RABL3Q5HYI8 236 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 ZC3H12BQ5HYM0 836 aaKnown RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 PDSS1Q5T2R2 415 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 SUSD4Q5VX71 490 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 FAM160B1Q5W0V3 765 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 SLC39A4Q6P5W5 647 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 RANBP10Q6VN20 620 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 FAM196AQ6ZSG2 479 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 OVCH2Q7RTZ1 564 aa9.39□□□□□ -0.91
SIX4-202ENST00000554079 ZC3HC1Q86WB0 502 aaKnown RBP9.39□□□□□ -0.91
SIX4-202ENST00000554079 ZSWIM9Q86XI8 627 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms