RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 KLHL42Q9P2K6 505 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 COQ6Q9Y2Z9 468 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 NBASA2RRP1 2371 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TBC1D3DA0A087WVF3 549 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TBC1D3IA0A087WXS9 549 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TBC1D3EA0A087X179 549 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TBC1D3KA0A087X1G2 549 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 CCDC189A1A4V9 331 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TBC1D3FA6NER0 549 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TBC1D3LB9A6J9 549 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 GPR39O43194 453 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 MAGEC1O60732 1142 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 RNGTTO60942 597 aaKnown RBP14.21□□□□□ -0.13
SHMT2-208ENST00000553868 KLHL2O95198 593 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 SLC25A14O95258 325 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-208ENST00000553868 MT-CO3P00414 261 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 LTA4HP09960 611 aaKnown RBP14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TBC1D3HP0C7X1 549 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 ATP1B2P14415 290 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-208ENST00000553868 CCR10P46092 362 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 CBX1P83916 185 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 MPP2Q14168 576 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 LRRC14Q15048 493 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TTLL9Q3SXZ7 439 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 LINC00303Q3SY05 128 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 CTSL3PQ5NE16 218 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TBC1D3GQ6DHY5 549 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TBC1D3CQ6IPX1 549 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 LVRNQ6Q4G3 990 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 ADAMTSL4Q6UY14 1074 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 CLEC14AQ86T13 490 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 CEP97Q8IW35 865 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TRIM42Q8IWZ5 723 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 TBC1D3Q8IZP1 549 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-208ENST00000553868 NKAPQ8N5F7 415 aaKnown RBP14.21□□□□□ -0.13
SHMT2-208ENST00000553868 CCDC63Q8NA47 563 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 OR2T34Q8NGX1 318 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 SREK1Q8WXA9 508 aaKnown RBP14.21□□□□□ -0.13
SHMT2-208ENST00000553868 FAM111AQ96PZ2 611 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 PAIP2Q9BPZ3 127 aaKnown RBP14.21□□□□□ -0.13
SHMT2-208ENST00000553868 C1QTNF2Q9BXJ5 285 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 STARD5Q9NSY2 213 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
SHMT2-208ENST00000553868 OAS3Q9Y6K5 1087 aaKnown RBP14.21□□□□□ -0.13
SHMT2-208ENST00000553868 A0A1W2PQU0 124 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 FADS2P1A8MWK0 482 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 KPNA5O15131 536 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 ASMTLO95671 621 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 FTH1P02794 183 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 WNT1P04628 370 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 ITGB6P18564 788 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 RGS4P49798 205 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 C21orf59P57076 290 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 GNGT1P63211 74 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 GUCY1A3Q02108 690 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 TLE1Q04724 770 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 BNIP3Q12983 259 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 GTF2H3Q13889 308 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 TMEM259Q4ZIN3 620 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 RDH11Q8TC12 318 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 INPP5DQ92835 1189 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 SCYL1Q96KG9 808 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 SLC6A18Q96N87 628 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 GPR21Q99679 349 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 BOCQ9BWV1 1114 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 SLC17A9Q9BYT1 436 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 DPH1Q9BZG8 443 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 NMRAL1Q9HBL8 299 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 ASCL3Q9NQ33 180 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 SLC17A7Q9P2U7 560 aa14.2□□□□□ -0.14
SHMT2-208ENST00000553868 RUVBL2Q9Y230 463 aaKnown RBP14.2□□□□□ -0.14
SHMT2-208ENST00000553868 BIRC5O15392 142 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 VEGFDO43915 354 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 PLIN3O60664 434 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 NIPSNAP2O75323 286 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 RBP1P09455 135 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 CCDC166P0CW27 439 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 NEFHP12036 1026 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 ZNF37AP17032 561 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-208ENST00000553868 CD27P26842 260 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 ETV4P43268 484 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 WDR4P57081 412 aaKnown RBP14.19□□□□□ -0.14
SHMT2-208ENST00000553868 IL2P60568 153 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 ATP6V0D1P61421 351 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 IRF9Q00978 393 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 WSCD2Q2TBF2 565 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 SEL1L3Q68CR1 1132 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 LRRC8EQ6NSJ5 796 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 PNCKQ6P2M8 343 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 CDHR3Q6ZTQ4 885 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 PIM3Q86V86 326 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 TRIM69Q86WT6 500 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 CACTIN-AS1Q8N1I8 211 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 DENND6BQ8NEG7 585 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 KCTD4Q8WVF5 259 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 ZNF514Q96K75 400 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-208ENST00000553868 UBXN10Q96LJ8 280 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 PCED1AQ9H1Q7 454 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 CCDC134Q9H6E4 229 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 SPATS2LQ9NUQ6 558 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms