RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ACKR4Q9NPB9 350 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 MBNL1Q9NR56 388 aaKnown RBP2.98□□□□□ -1.93
VRK1-202ENST00000553683 ZNF701Q9NV72 531 aaPredicted RBP2.98□□□□□ -1.93
VRK1-202ENST00000553683 ARHGEF38Q9NXL2 777 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 TAS2R14Q9NYV8 317 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 HACL1Q9UJ83 578 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 PLAGL1Q9UM63 463 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 KCNK7Q9Y2U2 307 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 SPIN1Q9Y657 262 aaPredicted RBP2.98□□□□□ -1.93
VRK1-202ENST00000553683 COL2A1P02458 1487 aaPredicted RBP2.97□□□□□ -1.93
VRK1-202ENST00000553683 PRSS51A0A1B0GVH4 220 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 MEIOCA2RUB1 952 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 E9PI62 339 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 SH2B2O14492 632 aaPredicted RBP2.97□□□□□ -1.93
VRK1-202ENST00000553683 ARHGEF9O43307 516 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 ZNF500O60304 480 aaPredicted RBP2.97□□□□□ -1.93
VRK1-202ENST00000553683 DOK2O60496 412 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 AVILO75366 819 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 CREG1O75629 220 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 TPOP07202 933 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 ZNF883P0CG24 379 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 PSMC4P43686 418 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 GEMIN4P57678 1058 aaKnown RBP2.97□□□□□ -1.93
VRK1-202ENST00000553683 MC1RQ01726 317 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 PLA2G7Q13093 441 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 MAPRE1Q15691 268 aaKnown RBP2.97□□□□□ -1.93
VRK1-202ENST00000553683 PDLIM3Q53GG5 364 aaPredicted RBP2.97□□□□□ -1.93
VRK1-202ENST00000553683 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
VRK1-202ENST00000553683 TMCO3Q6UWJ1 677 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 SH2D5Q6ZV89 423 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 LDB1Q86U70 411 aaPredicted RBP2.97□□□□□ -1.93
VRK1-202ENST00000553683 TAF15Q92804 592 aaKnown RBP eCLIP2.97□□□□□ -1.93
VRK1-202ENST00000553683 GMPPAQ96IJ6 420 aaPredicted RBP2.97□□□□□ -1.93
VRK1-202ENST00000553683 OPRPNQ99935 248 aaPredicted RBP2.97□□□□□ -1.93
VRK1-202ENST00000553683 VN1R1Q9GZP7 353 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 FGF22Q9HCT0 170 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 BLOC1S4Q9NUP1 217 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 GIMAP4Q9NUV9 329 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 BARHL2Q9NY43 387 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 OSGIN1Q9UJX0 560 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 MMP24Q9Y5R2 645 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 RNF215Q9Y6U7 377 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 CACNA1FO60840 1977 aa2.97□□□□□ -1.93
VRK1-202ENST00000553683 STK36Q9NRP7 1315 aa2.96□□□□□ -1.93
VRK1-202ENST00000553683 RSF1Q96T23 1441 aaPredicted RBP2.96□□□□□ -1.94
VRK1-202ENST00000553683 IGKV3D-15A0A087WSY6 115 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 A0A087WW49 117 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 FSD2A1L4K1 749 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 HEPACAM2A8MVW5 462 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 KLF11O14901 512 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 CSH1P0DML2 217 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 CSH2P0DML3 217 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 TRIM21P19474 475 aaKnown RBP2.96□□□□□ -1.94
VRK1-202ENST00000553683 CEACAM8P31997 349 aaPredicted RBP2.96□□□□□ -1.94
VRK1-202ENST00000553683 BMXP51813 675 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 PPARDQ03181 441 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 CHAF1BQ13112 559 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 PRKAA1Q13131 559 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 BAATQ14032 418 aaPredicted RBP2.96□□□□□ -1.94
VRK1-202ENST00000553683 C14orf177Q52M58 125 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 SPATA1Q5VX52 437 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 MZT2BQ6NZ67 158 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 PSRC1Q6PGN9 363 aaPredicted RBP2.96□□□□□ -1.94
VRK1-202ENST00000553683 TRIM65Q6PJ69 517 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 SZRD1Q7Z422 152 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 ADGRA1Q86SQ6 560 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 KRTAP7-1Q8IUC3 87 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 POC5Q8NA72 575 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 EXD1Q8NHP7 514 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 GRHL3Q8TE85 626 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 RNF128Q8TEB7 428 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 PTPMT1Q8WUK0 201 aaPredicted RBP2.96□□□□□ -1.94
VRK1-202ENST00000553683 LINC00479Q96M42 142 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 C16orf70Q9BSU1 422 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 LMF2Q9BU23 707 aaKnown RBP2.96□□□□□ -1.94
VRK1-202ENST00000553683 GHITMQ9H3K2 345 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 ZNF71Q9NQZ8 489 aaPredicted RBP2.96□□□□□ -1.94
VRK1-202ENST00000553683 ATAD3AQ9NVI7 634 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 NSMCE4AQ9NXX6 385 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 SPHK1Q9NYA1 384 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 ZDHHC2Q9UIJ5 367 aa2.96□□□□□ -1.94
VRK1-202ENST00000553683 ZNF215Q9UL58 517 aaPredicted RBP2.96□□□□□ -1.94
VRK1-202ENST00000553683 NOTCH3Q9UM47 2321 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 IGHV4-4A0A075B6R2 117 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 A0A087X002 238 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 A0A1W2PQ09 198 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 CTDSP2O14595 271 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 KHDRBS3O75525 346 aaKnown RBP2.95□□□□□ -1.94
VRK1-202ENST00000553683 GJA1P17302 382 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 SAT1P21673 171 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 SLC9A3P48764 834 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 IRX1P78414 480 aaPredicted RBP2.95□□□□□ -1.94
VRK1-202ENST00000553683 CX3CL1P78423 397 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 TMF1P82094 1093 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 GPR17Q13304 367 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 SIM2Q14190 667 aaPredicted RBP2.95□□□□□ -1.94
VRK1-202ENST00000553683 PCLAFQ15004 111 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 WTAPQ15007 396 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 P2RY6Q15077 328 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 NTRK2Q16620 822 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms