RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 TNFSF15O95150 251 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 S1PR4O95977 384 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 JMJD7P0C870 316 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 PPM1FP49593 454 aaPredicted RBP17.98■□□□□ 0.47
CPSF2-202ENST00000553427 CALCOCO2Q13137 446 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 KRT33BQ14525 404 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 STEAP4Q687X5 459 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 PRSS42Q7Z5A4 293 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 IGDCC3Q8IVU1 814 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 CNTN4Q8IWV2 1026 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 RCBTB1Q8NDN9 531 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 GABPB2Q8TAK5 448 aaPredicted RBP17.98■□□□□ 0.47
CPSF2-202ENST00000553427 ZDHHC12Q96GR4 267 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 C9orf72Q96LT7 481 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 CD180Q99467 661 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 WDR83Q9BRX9 315 aaKnown RBP17.98■□□□□ 0.47
CPSF2-202ENST00000553427 RAB17Q9H0T7 212 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 TFB2MQ9H5Q4 396 aaKnown RBP17.98■□□□□ 0.47
CPSF2-202ENST00000553427 PLAC1Q9HBJ0 212 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 IL1RAPL1Q9NZN1 696 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 SEMA5BQ9P283 1151 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 ACSL6Q9UKU0 697 aa17.98■□□□□ 0.47
CPSF2-202ENST00000553427 OR5K3A6NET4 321 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 IQCF5A8MTL0 148 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 B4E171 279 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 CAPN5O15484 640 aaPredicted RBP17.97■□□□□ 0.47
CPSF2-202ENST00000553427 TLX3O43711 291 aaPredicted RBP17.97■□□□□ 0.47
CPSF2-202ENST00000553427 BANF1O75531 89 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 ATP5DP30049 168 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 CSTF2P33240 577 aaKnown RBP eCLIP17.97■□□□□ 0.47
CPSF2-202ENST00000553427 TSPAN7P41732 249 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 ELK3P41970 407 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 SLC1A2P43004 574 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 GFERP55789 205 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 GBX1Q14549 363 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 PLEKHS1Q5SXH7 462 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 KCNMB4Q86W47 210 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 OOSP2Q86WS3 158 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 TBC1D21Q8IYX1 336 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 CARFQ8N187 725 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 KRT222Q8N1A0 295 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 PHACTR1Q9C0D0 580 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 LATS2Q9NRM7 1088 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 GRHL1Q9NZI5 618 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 KLHL42Q9P2K6 505 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 ZC3H7BQ9UGR2 993 aaKnown RBP17.97■□□□□ 0.47
CPSF2-202ENST00000553427 FBXO5Q9UKT4 447 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 UTP11Q9Y3A2 253 aaKnown RBP17.97■□□□□ 0.47
CPSF2-202ENST00000553427 MRFAP1Q9Y605 127 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 COMMD10Q9Y6G5 202 aa17.97■□□□□ 0.47
CPSF2-202ENST00000553427 SRRM3A6NNA2 597 aaPredicted RBP17.96■□□□□ 0.47
CPSF2-202ENST00000553427 MATN2O00339 956 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 NVLO15381 856 aaKnown RBP17.96■□□□□ 0.47
CPSF2-202ENST00000553427 HGFP14210 728 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 PKMP14618 531 aaKnown RBP17.96■□□□□ 0.47
CPSF2-202ENST00000553427 ITGB6P18564 788 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 MPSTP25325 297 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 FMO4P31512 558 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 PCBP4P57723 403 aaKnown RBP17.96■□□□□ 0.47
CPSF2-202ENST00000553427 MRPS25P82663 173 aaKnown RBP17.96■□□□□ 0.47
CPSF2-202ENST00000553427 HSPA14Q0VDF9 509 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 HSP90AA5PQ58FG0 334 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 UNC5DQ6UXZ4 953 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 UNC5AQ6ZN44 842 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 KIAA0408Q6ZU52 694 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 OTOAQ7RTW8 1153 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 GALNT7Q86SF2 657 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 DENND6AQ8IWF6 608 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 BMPERQ8N8U9 685 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 C2CD4AQ8NCU7 369 aaPredicted RBP17.96■□□□□ 0.47
CPSF2-202ENST00000553427 OR5K2Q8NHB8 316 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 PWWP2AQ96N64 755 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 TGM7Q96PF1 710 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 FERD3LQ96RJ6 166 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 TRIT1Q9H3H1 467 aaKnown RBP17.96■□□□□ 0.47
CPSF2-202ENST00000553427 ZNF768Q9H5H4 540 aaKnown RBP17.96■□□□□ 0.47
CPSF2-202ENST00000553427 PISDQ9UG56 409 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 POLG2Q9UHN1 485 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 CHMP2BQ9UQN3 213 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 ASF1AQ9Y294 204 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 CRYL1Q9Y2S2 319 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 RAXQ9Y2V3 346 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 PCDHGA3Q9Y5H0 932 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 LAMA5O15230 3695 aa17.96■□□□□ 0.47
CPSF2-202ENST00000553427 A0A087WV48 116 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 EIF3HO15372 352 aaKnown RBP eCLIP17.95■□□□□ 0.46
CPSF2-202ENST00000553427 RPN2P04844 631 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 ETV5P41161 510 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 LEPRP48357 1165 aaKnown RBP17.95■□□□□ 0.46
CPSF2-202ENST00000553427 RAB15P59190 212 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 CAV1Q03135 178 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 CTBP1Q13363 440 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 BRD3Q15059 726 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 ZNF789Q5FWF6 425 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 FOXR1Q6PIV2 292 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 NAPRTQ6XQN6 538 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 VRK3Q8IV63 474 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 MNS1Q8NEH6 495 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 OR52E1Q8NGJ3 308 aa17.95■□□□□ 0.46
CPSF2-202ENST00000553427 KIF18AQ8NI77 898 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms