RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 RP1P56715 2156 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 SLC5A10A0PJK1 596 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 CASC3O15234 703 aaKnown RBP16.91■□□□□ 0.3
CDK4-208ENST00000551706 EIF3HO15372 352 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDK4-208ENST00000551706 UBXN7O94888 489 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 WISP1O95388 367 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 APOA4P06727 396 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 PDX1P52945 283 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 RHDQ02161 417 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 ZFP36L1Q07352 338 aaKnown RBP16.91■□□□□ 0.3
CDK4-208ENST00000551706 PDIA2Q13087 525 aaKnown RBP16.91■□□□□ 0.3
CDK4-208ENST00000551706 TRA2AQ13595 282 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDK4-208ENST00000551706 GPR18Q14330 331 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 TMED2Q15363 201 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 HSP90AA5PQ58FG0 334 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 NKAIN2Q5VXU1 208 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 TMEM71Q6P5X7 295 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 KLHL35Q6PF15 583 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 IGDCC3Q8IVU1 814 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 MMGT1Q8N4V1 131 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 CEP112Q8N8E3 955 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 ATXN7L3BQ96GX2 97 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 LIN37Q96GY3 246 aaPredicted RBP16.91■□□□□ 0.3
CDK4-208ENST00000551706 PWWP2AQ96N64 755 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 NUDT22Q9BRQ3 303 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 TBC1D10AQ9BXI6 508 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 PHACTR1Q9C0D0 580 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 GRHL1Q9NZI5 618 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 IL1RAPL1Q9NZN1 696 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 CHMP2BQ9UQN3 213 aa16.91■□□□□ 0.3
CDK4-208ENST00000551706 CFAP20Q9Y6A4 193 aaKnown RBP16.91■□□□□ 0.3
CDK4-208ENST00000551706 AMD1P17707 334 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 ITGB6P18564 788 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 PDHA2P29803 388 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 FMO4P31512 558 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 CCR7P32248 378 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 MAPK9P45984 424 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 PREPP48147 710 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 LIMK2P53671 638 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 FRG1Q14331 258 aaKnown RBP16.9■□□□□ 0.3
CDK4-208ENST00000551706 PLCL1Q15111 1095 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 STEAP4Q687X5 459 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 UNC5AQ6ZN44 842 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 B3GNT8Q7Z7M8 397 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 PLXDC1Q8IUK5 500 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 SLITRK4Q8IW52 837 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 DENND6AQ8IWF6 608 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 SPACA3Q8IXA5 215 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 WDR36Q8NI36 951 aaKnown RBP16.9■□□□□ 0.3
CDK4-208ENST00000551706 TFGQ92734 400 aaPredicted RBP16.9■□□□□ 0.3
CDK4-208ENST00000551706 ART4Q93070 314 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 CERS2Q96G23 380 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 CFAP36Q96G28 342 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 BIRC8Q96P09 236 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 LRRC1Q9BTT6 524 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 FOXP3Q9BZS1 431 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 CCDC68Q9H2F9 335 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 KIR3DX1Q9H7L2 352 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 MVB12BQ9H7P6 319 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 AKAP7Q9P0M2 348 aaPredicted RBP16.9■□□□□ 0.3
CDK4-208ENST00000551706 FBXO5Q9UKT4 447 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 CRYL1Q9Y2S2 319 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 COMMD10Q9Y6G5 202 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 PTPN13Q12923 2485 aa16.9■□□□□ 0.3
CDK4-208ENST00000551706 CCDC187A0A096LP49 1063 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 IQCF5A8MTL0 148 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 S1PR4O95977 384 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 PKMP14618 531 aaKnown RBP16.89■□□□□ 0.29
CDK4-208ENST00000551706 AOAHP28039 575 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 CSF2RBP32927 897 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 SLC1A2P43004 574 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 LSSP48449 732 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 PLTPP55058 493 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 SRSF1Q07955 248 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDK4-208ENST00000551706 HSPA14Q0VDF9 509 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 CTBP1Q13363 440 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 BRD3Q15059 726 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 GLE1Q53GS7 698 aaKnown RBP16.89■□□□□ 0.29
CDK4-208ENST00000551706 CTSL3PQ5NE16 218 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 HP1BP3Q5SSJ5 553 aaPredicted RBP16.89■□□□□ 0.29
CDK4-208ENST00000551706 PHF19Q5T6S3 580 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 KIAA0408Q6ZU52 694 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 OTOAQ7RTW8 1153 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 CNTN4Q8IWV2 1026 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 SLC22A15Q8IZD6 547 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 LSMEM2Q8N112 164 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 KRT222Q8N1A0 295 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 FBXO36Q8NEA4 188 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 GSDMBQ8TAX9 411 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 NCSTNQ92542 709 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 FERD3LQ96RJ6 166 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 CMKLR1Q99788 373 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 SEMA4CQ9C0C4 833 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 POLR1BQ9H9Y6 1135 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 IARS2Q9NSE4 1012 aaKnown RBP16.89■□□□□ 0.29
CDK4-208ENST00000551706 PDP2Q9P2J9 529 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 PCDHGA8Q9Y5G5 932 aa16.89■□□□□ 0.29
CDK4-208ENST00000551706 PRAMEF33A0A0G2JMD5 474 aa16.88■□□□□ 0.29
CDK4-208ENST00000551706 IGHV5-10-1A0A0J9YXX1 117 aa16.88■□□□□ 0.29
CDK4-208ENST00000551706 E5RI56 91 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms