RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TUBB4BP68371 445 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 PDE1BQ01064 536 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 XRCC4Q13426 336 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 LAMB3Q13751 1172 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 TUBB2AQ13885 445 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 BCL7AQ4VC05 210 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 TFDP3Q5H9I0 405 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 FNBP1LQ5T0N5 605 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 TMTC4Q5T4D3 741 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 IZUMO3Q5VZ72 239 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 PAPD7Q5XG87 772 aaKnown RBP7.43□□□□□ -1.22
NEK3-201ENST00000550331 ARMC6Q6NXE6 501 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 TMEM220Q6QAJ8 160 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 ZNF517Q6ZMY9 492 aaPredicted RBP7.43□□□□□ -1.22
NEK3-201ENST00000550331 PID1Q7Z2X4 250 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 TMEM135Q86UB9 458 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 ZC3H18Q86VM9 953 aaKnown RBP7.43□□□□□ -1.22
NEK3-201ENST00000550331 CNGA4Q8IV77 575 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 KATNAL2Q8IYT4 538 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 RCOR2Q8IZ40 523 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 SLC25A41Q8N5S1 370 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 OR2L2Q8NH16 312 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 ZNF398Q8TD17 642 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 SSC4DQ8WTU2 575 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 RNF31Q96EP0 1072 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 LINC00615Q96LM1 132 aaPredicted RBP7.43□□□□□ -1.22
NEK3-201ENST00000550331 LRFN5Q96NI6 719 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 QKIQ96PU8 341 aaKnown RBP eCLIP7.43□□□□□ -1.22
NEK3-201ENST00000550331 MAP3K3Q99759 626 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 C19orf43Q9BQ61 176 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 TUBB2BQ9BVA1 445 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 FSD1LQ9BXM9 530 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 WWP1Q9H0M0 922 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 KIR3DX1Q9H7L2 352 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 UGT1A7Q9HAW7 530 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 UGT1A10Q9HAW8 530 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 UGT1A8Q9HAW9 530 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 HRASLS2Q9NWW9 162 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 RSPH14Q9UHP6 348 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 SLC24A2Q9UI40 661 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 VPS4AQ9UN37 437 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 PSMD13Q9UNM6 376 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 BTRCQ9Y297 605 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.43□□□□□ -1.22
NEK3-201ENST00000550331 HYOU1Q9Y4L1 999 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 PCDHGA9Q9Y5G4 932 aaKnown RBP7.43□□□□□ -1.22
NEK3-201ENST00000550331 CELSR2Q9HCU4 2923 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 SHANK1Q9Y566 2161 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 hCG_1818297A0A087WSY0 165 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 C5orf60A6NFR6 353 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 AGAP14A8MT82 685 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 MATN2O00339 956 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 BUD23O43709 281 aaKnown RBP7.42□□□□□ -1.22
NEK3-201ENST00000550331 SCRG1O75711 98 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 KRT38O76015 456 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 ANXA9O76027 345 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 SRP72O76094 671 aaKnown RBP7.42□□□□□ -1.22
NEK3-201ENST00000550331 ZRANB2O95218 330 aaKnown RBP eCLIP7.42□□□□□ -1.22
NEK3-201ENST00000550331 RAB40ALP0C0E4 278 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 MSL3P1P0C860 447 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 RALBP11234 206 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 PTMSP20962 102 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 LPOP22079 712 aaPredicted RBP7.42□□□□□ -1.22
NEK3-201ENST00000550331 GNLYP22749 145 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 NDUFS1P28331 727 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 PBLDP30039 288 aaPredicted RBP7.42□□□□□ -1.22
NEK3-201ENST00000550331 CA5AP35218 305 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 PGDP52209 483 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 GEMP55040 296 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 GSDMDP57764 484 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 ADCY2Q08462 1091 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 TAF1AQ15573 450 aaPredicted RBP7.42□□□□□ -1.22
NEK3-201ENST00000550331 KAZNQ674X7 775 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 ITPRIPL1Q6GPH6 555 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 CAPRIN2Q6IMN6 1127 aaKnown RBP7.42□□□□□ -1.22
NEK3-201ENST00000550331 CERS6Q6ZMG9 384 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 BBS12Q6ZW61 710 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 TMEM126BQ8IUX1 230 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 VSTM4Q8IW00 320 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 CPT1BQ92523 772 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 ZNF501Q96CX3 271 aaPredicted RBP7.42□□□□□ -1.22
NEK3-201ENST00000550331 RBM41Q96IZ5 413 aaKnown RBP7.42□□□□□ -1.22
NEK3-201ENST00000550331 C12orf66Q96MD2 445 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 RUFY1Q96T51 708 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 FERMT1Q9BQL6 677 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 CCM2Q9BSQ5 444 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 TRIM55Q9BYV6 548 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 GBA3Q9H227 469 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 ASB8Q9H765 288 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 FANCEQ9HB96 536 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 SYTL2Q9HCH5 934 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 MLXIPLQ9NP71 852 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 KCND1Q9NSA2 647 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 AAR2Q9Y312 384 aaKnown RBP7.42□□□□□ -1.22
NEK3-201ENST00000550331 HEBP2Q9Y5Z4 205 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 ALG6Q9Y672 507 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 ARL5AQ9Y689 179 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 COLEC10Q9Y6Z7 277 aa7.42□□□□□ -1.22
NEK3-201ENST00000550331 ZNF106Q9H2Y7 1883 aaKnown RBP7.42□□□□□ -1.22
NEK3-201ENST00000550331 POLQO75417 2590 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms