RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 TNFRSF11BO00300 401 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 MAFKO60675 156 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 PRR23D2P0DMB1 279 aaPredicted RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 HSD17B1P14061 328 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 HOXA11P31270 313 aaPredicted RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ARRB2P32121 409 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 MAGEA8P43361 318 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 FOXA1P55317 472 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 RPS24P62847 133 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 SEMG2Q02383 582 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ANKDD1AQ495B1 522 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 LCN8Q6JVE9 175 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 SERPINA9Q86WD7 417 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 CLIP4Q8N3C7 705 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ZNF347Q96SE7 839 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 FUNDC2Q9BWH2 189 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 NPLQ9BXD5 320 aaPredicted RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 CRISPLD1Q9H336 500 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 IGSF5Q9NSI5 407 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ARMC1Q9NVT9 282 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.05□□□□□ -0.85e-7■□□□□ 8.3
SMARCC2-209ENST00000550164 TMEM181Q9P2C4 612 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 PCDHB1Q9Y5F3 818 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 H0YAE9 185 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 KPNA6O60684 536 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 PGRP06401 933 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 HAPLN1P10915 354 aaPredicted RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 EPORP19235 508 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 PTGER3P43115 390 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 OLR1P78380 273 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ZNF33AQ06730 810 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 NDUFA5Q16718 116 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ALFQ53S48 1182 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 PYDC2Q56P42 97 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 NOL9Q5SY16 702 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 HACD2Q6Y1H2 254 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 PIWIL3Q7Z3Z3 882 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 LSMEM2Q8N112 164 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 TRUB1Q8WWH5 349 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 MRPS31Q92665 395 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 PYCR2Q96C36 320 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 TMEM169Q96HH4 297 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 NSUN3Q9H649 340 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 OLAHQ9NV23 265 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 GLI3P10071 1580 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 TCRBV3S1A0A5B6 114 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 OR10H3O60404 316 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 CREG1O75629 220 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 CATP04040 527 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 TALDO1P37837 337 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 MAP2K4P45985 399 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 CDH12P55289 794 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 MXD1Q05195 221 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 OR4D1Q15615 310 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 TRMT11Q7Z4G4 463 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 SYVN1Q86TM6 617 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 CLDN19Q8N6F1 224 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 GLB1L3Q8NCI6 653 aaPredicted RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 STARD8Q92502 1023 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 HDAC2Q92769 488 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 RNFT2Q96EX2 444 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 LRCH3Q96II8 777 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 CITED4Q96RK1 184 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 C16orf70Q9BSU1 422 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 EMILIN2Q9BXX0 1053 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 LHPPQ9H008 270 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 GSTO2Q9H4Y5 243 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 PCDHGB5Q9Y5G0 923 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ZFP37Q9Y6Q3 630 aaPredicted RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 RREB1Q92766 1687 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 BTBD19C9JJ37 291 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ACOT8O14734 319 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 GABRB3P28472 473 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 DPP6P42658 865 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 RPS7P62081 194 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 MTA1Q13330 715 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 TIGD6Q17RP2 521 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 CPTPQ5TA50 214 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ARMC8Q8IUR7 673 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ADGRG5Q8IZF4 528 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 PIH1D2Q8WWB5 315 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 KHSRPQ92945 711 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 GTPBP3Q969Y2 492 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 UROC1Q96N76 676 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 NMUR1Q9HB89 426 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ABCB9Q9NP78 766 aa10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 EVLQ9UI08 416 aaPredicted RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 ARIH1Q9Y4X5 557 aaPredicted RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 MAGED1Q9Y5V3 778 aaPredicted RBP10.05□□□□□ -0.8
SMARCC2-209ENST00000550164 NUP205Q92621 2012 aa10.04□□□□□ -0.8
SMARCC2-209ENST00000550164 CLDN11O75508 207 aa10.04□□□□□ -0.8
SMARCC2-209ENST00000550164 ST8SIA6P61647 398 aa10.04□□□□□ -0.8
SMARCC2-209ENST00000550164 SMAD3P84022 425 aaKnown RBP10.04□□□□□ -0.8
SMARCC2-209ENST00000550164 CACNG1Q06432 222 aa10.04□□□□□ -0.8
SMARCC2-209ENST00000550164 SCAPQ12770 1279 aa10.04□□□□□ -0.8
SMARCC2-209ENST00000550164 ELAVL2Q12926 359 aaKnown RBP10.04□□□□□ -0.8
SMARCC2-209ENST00000550164 MAP2K5Q13163 448 aa10.04□□□□□ -0.8
SMARCC2-209ENST00000550164 TAF1AQ15573 450 aaPredicted RBP10.04□□□□□ -0.8
SMARCC2-209ENST00000550164 USP39Q53GS9 565 aaKnown RBP10.04□□□□□ -0.8
SMARCC2-209ENST00000550164 PAGE3Q5JUK9 113 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms