RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SLC5A10A0PJK1 596 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 MATN2O00339 956 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 POLR1CO15160 346 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 PFDN6O15212 129 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 NDUFS3O75489 264 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 SNRNP200O75643 2136 aaKnown RBP16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 FOXM1Q08050 763 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 PTK6Q13882 451 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 MANEAQ5SRI9 462 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 PTRHD1Q6GMV3 140 aaKnown RBP16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 CYB5D1Q6P9G0 228 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 CCDC81Q6ZN84 652 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 CTRCQ99895 268 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 SRMSQ9H3Y6 488 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 SEMA5BQ9P283 1151 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 PCYOX1Q9UHG3 505 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 SAR1BQ9Y6B6 198 aa16.77■□□□□ 0.28
CHMP1A-208ENST00000550102 ATMQ13315 3056 aa16.77■□□□□ 0.27
CHMP1A-208ENST00000550102 TEX51A0A1B0GUA7 166 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 FAM237BA0A1B0GVD1 139 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 UBA6A0AVT1 1052 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 SDR42E2A6NKP2 422 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 APOA4P06727 396 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 ITGB6P18564 788 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 NELFEP18615 380 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 MAGEA3P43357 314 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 PRKAA1Q13131 559 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 TYSND1Q2T9J0 566 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 ARHGAP40Q5TG30 622 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 SDCCAG8Q86SQ7 713 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 VASH2Q86V25 355 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 KMT5CQ86Y97 462 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 CARFQ8N187 725 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 NAT8LQ8N9F0 302 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 PHC3Q8NDX5 983 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 OR4E2Q8NGC2 313 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 OR52E1Q8NGJ3 308 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 LKAAEAR1Q8TD35 194 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 SNRNP27Q8WVK2 155 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 ASZ1Q8WWH4 475 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 ZNF669Q96BR6 464 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 SLC41A2Q96JW4 573 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 RUNDC3BQ96NL0 473 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 PANX3Q96QZ0 392 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 MAP3K3Q99759 626 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 CARD6Q9BX69 1037 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 P2RY12Q9H244 342 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 TRIT1Q9H3H1 467 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 APMAPQ9HDC9 416 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 POMT2Q9UKY4 750 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 ASF1AQ9Y294 204 aa16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
CHMP1A-208ENST00000550102 IGHV5-51A0A0C4DH38 117 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 MAGEB16A2A368 324 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 GSAPA4D1B5 854 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 BHMG1C9JSJ3 638 aaPredicted RBP16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 K7ENP7 123 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 POLR2CP19387 275 aaPredicted RBP16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 OGNP20774 298 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 RPS3P23396 243 aaKnown RBP eCLIP16.75■□□□□ 0.273e-6■■■■□ 19.8
CHMP1A-208ENST00000550102 ACADLP28330 430 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 CCR7P32248 378 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 ARCN1P48444 511 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 ARL4DP49703 201 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 CSE1LP55060 971 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 SH3BP2P78314 561 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 HSPA14Q0VDF9 509 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 PRKG2Q13237 762 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 IL11RAQ14626 422 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 DNAJC21Q5F1R6 531 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 RNASEH2BQ5TBB1 312 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 INO80CQ6PI98 192 aaPredicted RBP16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 NAPRTQ6XQN6 538 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 CREG2Q8IUH2 290 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 SLC22A15Q8IZD6 547 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 SIDT2Q8NBJ9 832 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 OR5AR1Q8NGP9 310 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 OR6C1Q96RD1 312 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 UBL7Q96S82 380 aaPredicted RBP16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 TCF12Q99081 682 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 TFB2MQ9H5Q4 396 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 VPS9D1Q9Y2B5 631 aa16.75■□□□□ 0.27
CHMP1A-208ENST00000550102 KALRNO60229 2985 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 IQCF5A8MTL0 148 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 GOLGA8KD6RF30 607 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 GOLGA8TH3BQL2 631 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 DNALI1O14645 258 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 KDM1AO60341 852 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 RAD1O60671 282 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 STK17BO94768 372 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 AOAHP28039 575 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 SHMT2P34897 504 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 PAFAH1B1P43034 410 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 KPNA2P52292 529 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 EIF3BP55884 814 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 TUBB3Q13509 450 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 DHX34Q14147 1143 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 ANKRD20A4Q4UJ75 823 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 ZNF470Q6ECI4 717 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 SYDE1Q6ZW31 735 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms