RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 BPHLQ86WA6 291 aaPredicted RBP15.88■□□□□ 0.13
VPS29-207ENST00000549970 PTRH1Q86Y79 214 aaKnown RBP15.88■□□□□ 0.13
VPS29-207ENST00000549970 CCDC89Q8N998 374 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 OR52E1Q8NGJ3 308 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 OR13J1Q8NGT2 312 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 CT55Q8WUE5 264 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 HGH1Q9BTY7 390 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 TUBB2BQ9BVA1 445 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 RAB6BQ9NRW1 208 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 SLC2A6Q9UGQ3 507 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 KCND3Q9UK17 655 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 POMT2Q9UKY4 750 aa15.88■□□□□ 0.13
VPS29-207ENST00000549970 HEATR9A2RTY3 570 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 SLC9B1P1A6NJY1 282 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 BTN3A3O00478 584 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 BTN3A1O00481 513 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 TERTO14746 1132 aaKnown RBP15.87■□□□□ 0.13
VPS29-207ENST00000549970 ARHGAP6O43182 974 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 SUN1O94901 812 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 PSMA3P25788 255 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 RPA4Q13156 261 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 PRKG2Q13237 762 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 DNASE1L3Q13609 305 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 CRTC2Q53ET0 693 aaPredicted RBP15.87■□□□□ 0.13
VPS29-207ENST00000549970 MEI1Q5TIA1 1274 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 NAPRTQ6XQN6 538 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 TMEM126BQ8IUX1 230 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 CARFQ8N187 725 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 GLIS1Q8NBF1 620 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 APOBEC4Q8WW27 367 aaKnown RBP15.87■□□□□ 0.13
VPS29-207ENST00000549970 ELMO1Q92556 727 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 TFGQ92734 400 aaPredicted RBP15.87■□□□□ 0.13
VPS29-207ENST00000549970 HDAC10Q969S8 669 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.87■□□□□ 0.13
VPS29-207ENST00000549970 FCRL4Q96PJ5 515 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 TLR10Q9BXR5 811 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 XKR8Q9H6D3 395 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 MVB12BQ9H7P6 319 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 AKIRIN1Q9H9L7 192 aaPredicted RBP15.87■□□□□ 0.13
VPS29-207ENST00000549970 LZTFL1Q9NQ48 299 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 TUBD1Q9UJT1 453 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 BTRCQ9Y297 605 aa15.87■□□□□ 0.13
VPS29-207ENST00000549970 TENM4Q6N022 2769 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 MATN2O00339 956 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 QSOX1O00391 747 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 SUV39H1O43463 412 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 CPNE3O75131 537 aaKnown RBP15.86■□□□□ 0.13
VPS29-207ENST00000549970 SCRG1O75711 98 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 GOT2P00505 430 aaKnown RBP15.86■□□□□ 0.13
VPS29-207ENST00000549970 FTH1P02794 183 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 APRTP07741 180 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 GSTM1P09488 218 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 FURINP09958 794 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 ZSCAN5DPP0CG00 497 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 GSTM4Q03013 218 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 SEMA5AQ13591 1074 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 BOP1Q14137 746 aaKnown RBP15.86■□□□□ 0.13
VPS29-207ENST00000549970 TSTD2Q5T7W7 516 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 FAM199XQ6PEV8 388 aaPredicted RBP15.86■□□□□ 0.13
VPS29-207ENST00000549970 AFTPHQ6ULP2 937 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 PACS1Q6VY07 963 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 ATG14Q6ZNE5 492 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 AMIGO1Q86WK6 493 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 UBE2Q2Q8WVN8 375 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 ZNF501Q96CX3 271 aaPredicted RBP15.86■□□□□ 0.13
VPS29-207ENST00000549970 ZNF778Q96MU6 729 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 RUFY1Q96T51 708 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 TFB2MQ9H5Q4 396 aaKnown RBP15.86■□□□□ 0.13
VPS29-207ENST00000549970 CASS4Q9NQ75 786 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 ZNF71Q9NQZ8 489 aaPredicted RBP15.86■□□□□ 0.13
VPS29-207ENST00000549970 C1GALT1Q9NS00 363 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 KCND1Q9NSA2 647 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 PAK5Q9P286 719 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 SPTBP11277 2137 aa15.86■□□□□ 0.13
VPS29-207ENST00000549970 PIPSLA2A3N6 862 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 CDC14CA4D256 554 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 LIN7AO14910 233 aaPredicted RBP15.85■□□□□ 0.13
VPS29-207ENST00000549970 OR1I1O60431 355 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 CREG1O75629 220 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 OR56A5P0C7T3 313 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 ADRA1DP25100 572 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 PRDX3P30048 256 aaKnown RBP15.85■□□□□ 0.13
VPS29-207ENST00000549970 LAMB3Q13751 1172 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 SIX1Q15475 284 aaPredicted RBP15.85■□□□□ 0.13
VPS29-207ENST00000549970 SYTL3Q4VX76 610 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 PRAMEF17Q5VTA0 474 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 TMEM135Q86UB9 458 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 OR5AR1Q8NGP9 310 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 OR6P1Q8NGX9 317 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 C9orf43Q8TAL5 461 aaPredicted RBP15.85■□□□□ 0.13
VPS29-207ENST00000549970 RANBP9Q96S59 729 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 TWSG1Q9GZX9 223 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 KLHL25Q9H0H3 589 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 FANCEQ9HB96 536 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 ASF1AQ9Y294 204 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 PCDHGA6Q9Y5G7 932 aa15.85■□□□□ 0.13
VPS29-207ENST00000549970 C2orf74A8MZ97 194 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 C21orf140B9A014 251 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 WISP1O95388 367 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 CCDC175P0C221 793 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms