RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 AGTP01019 485 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 CYP2A7P20853 494 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 DCTP40126 519 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 PREPP48147 710 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 BCL7AQ4VC05 210 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 ZNF385CQ66K41 422 aaPredicted RBP15.98■□□□□ 0.15
SSH1-208ENST00000548522 CFAP206Q8IYR0 622 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 GLIS1Q8NBF1 620 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 SNRNP40Q96DI7 357 aaKnown RBP15.98■□□□□ 0.15
SSH1-208ENST00000548522 SMAD5Q99717 465 aaKnown RBP15.98■□□□□ 0.15
SSH1-208ENST00000548522 APOL2Q9BQE5 337 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 FICDQ9BVA6 458 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 DEF6Q9H4E7 631 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 FANCEQ9HB96 536 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 ACSL5Q9ULC5 683 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 PCDHGB7Q9Y5F8 929 aa15.98■□□□□ 0.15
SSH1-208ENST00000548522 CCL22O00626 93 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 SRP72O76094 671 aaKnown RBP15.97■□□□□ 0.15
SSH1-208ENST00000548522 LDLRP01130 860 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 COMTP21964 271 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 PRDX3P30048 256 aaKnown RBP15.97■□□□□ 0.15
SSH1-208ENST00000548522 OTX2P32243 289 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 MARCKSL1P49006 195 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 NR2C2P49116 596 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 PRKAA1Q13131 559 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 KYNUQ16719 465 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 PLEKHN1Q494U1 663 aaPredicted RBP15.97■□□□□ 0.15
SSH1-208ENST00000548522 SPOCD1Q6ZMY3 1216 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 CDHR3Q6ZTQ4 885 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 PID1Q7Z2X4 250 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 MAMDC2Q7Z304 686 aaPredicted RBP15.97■□□□□ 0.15
SSH1-208ENST00000548522 MRGPREQ86SM8 312 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 CARFQ8N187 725 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 OR4K2Q8NGD2 314 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 ZFPM2Q8WW38 1151 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 LCN9Q8WX39 176 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 LINC00615Q96LM1 132 aaPredicted RBP15.97■□□□□ 0.15
SSH1-208ENST00000548522 QKIQ96PU8 341 aaKnown RBP eCLIP15.97■□□□□ 0.15
SSH1-208ENST00000548522 DNAJC7Q99615 494 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 CHP1Q99653 195 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 FSD1LQ9BXM9 530 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 PITPNM3Q9BZ71 974 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 SLC29A3Q9BZD2 475 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 FAM96AQ9H5X1 160 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 ASB8Q9H765 288 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 C1GALT1Q9NS00 363 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 ASF1BQ9NVP2 202 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.97■□□□□ 0.15
SSH1-208ENST00000548522 RSPH14Q9UHP6 348 aa15.97■□□□□ 0.15
SSH1-208ENST00000548522 TEP1Q99973 2627 aaKnown RBP15.97■□□□□ 0.15
SSH1-208ENST00000548522 DYNC1I1O14576 645 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 ZNF749O43361 778 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 HCRTR1O43613 425 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 AKR1B10O60218 316 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 KLF7O75840 302 aaPredicted RBP15.96■□□□□ 0.15
SSH1-208ENST00000548522 CTSBP07858 339 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 ARHGAP25P42331 645 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 TNNT3P45378 269 aaPredicted RBP15.96■□□□□ 0.15
SSH1-208ENST00000548522 XIAPP98170 497 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 MPP3Q13368 585 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 KRT33BQ14525 404 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 DEFB110Q30KQ9 67 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 ODF2Q5BJF6 829 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 MED25Q71SY5 747 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 TRIM73Q86UV7 250 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 TMTC1Q8IUR5 882 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 CISD2Q8N5K1 135 aaKnown RBP15.96■□□□□ 0.15
SSH1-208ENST00000548522 TMEM102Q8N9M5 508 aaPredicted RBP15.96■□□□□ 0.15
SSH1-208ENST00000548522 ACVR1CQ8NER5 493 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 OR13C4Q8NGS5 318 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 HM13Q8TCT9 377 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 INPP5DQ92835 1189 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 RANBP9Q96S59 729 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 SRMSQ9H3Y6 488 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 XKR8Q9H6D3 395 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 DDX56Q9NY93 547 aaKnown RBP15.96■□□□□ 0.15
SSH1-208ENST00000548522 COLEC10Q9Y6Z7 277 aa15.96■□□□□ 0.15
SSH1-208ENST00000548522 CCDC66A2RUB6 948 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 WIPF3A6NGB9 483 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 SPOPO43791 374 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 CBX6O95503 412 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 DDAH2O95865 285 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 PRLHRP49683 370 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 TMPRSS15P98073 1019 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 TFDP2Q14188 446 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 ZNF658BQ4V348 819 aaPredicted RBP15.95■□□□□ 0.14
SSH1-208ENST00000548522 VWA5B1Q5TIE3 1220 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 C1orf189Q5VU69 101 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 PHC3Q8NDX5 983 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 OR52E1Q8NGJ3 308 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 TRAPPC9Q96Q05 1148 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 FERD3LQ96RJ6 166 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 HGH1Q9BTY7 390 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 OR52A5Q9H2C5 316 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 COG4Q9H9E3 785 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 FAM60AQ9NP50 221 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 G3BP2Q9UN86 482 aaKnown RBP15.95■□□□□ 0.14
SSH1-208ENST00000548522 NTNG1Q9Y2I2 539 aa15.95■□□□□ 0.14
SSH1-208ENST00000548522 hCG_1818297A0A087WSY0 165 aa15.94■□□□□ 0.14
SSH1-208ENST00000548522 E7EQ34 232 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms