RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 NACA2Q9H009 215 aa4.31□□□□□ -1.72
CBX5-203ENST00000547872 LSG1Q9H089 658 aaKnown RBP4.31□□□□□ -1.72
CBX5-203ENST00000547872 TM9SF3Q9HD45 589 aa4.31□□□□□ -1.72
CBX5-203ENST00000547872 DDX43Q9NXZ2 648 aaKnown RBP4.31□□□□□ -1.72
CBX5-203ENST00000547872 UXTQ9UBK9 157 aaPredicted RBP4.31□□□□□ -1.72
CBX5-203ENST00000547872 GRHPRQ9UBQ7 328 aa4.31□□□□□ -1.72
CBX5-203ENST00000547872 UBQLN1Q9UMX0 589 aaKnown RBP4.31□□□□□ -1.72
CBX5-203ENST00000547872 PCDHA12Q9UN75 941 aa4.31□□□□□ -1.72
CBX5-203ENST00000547872 SATB2Q9UPW6 733 aa4.31□□□□□ -1.72
CBX5-203ENST00000547872 TNFSF13BQ9Y275 285 aa4.31□□□□□ -1.72
CBX5-203ENST00000547872 TNFRSF18Q9Y5U5 241 aa4.31□□□□□ -1.72
CBX5-203ENST00000547872 COPG1Q9Y678 874 aaKnown RBP4.31□□□□□ -1.72
CBX5-203ENST00000547872 NAV2Q8IVL1 2488 aa4.31□□□□□ -1.72
CBX5-203ENST00000547872 PI4KAP42356 2102 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 LACTBL1A8MY62 500 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 K7ENP7 123 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 SYNCRIPO60506 623 aaKnown RBP4.3□□□□□ -1.72
CBX5-203ENST00000547872 NEMFO60524 1076 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 CNOT3O75175 753 aaKnown RBP4.3□□□□□ -1.72
CBX5-203ENST00000547872 CSO75390 466 aaKnown RBP4.3□□□□□ -1.72
CBX5-203ENST00000547872 TCEA3O75764 348 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 KRT19P08727 400 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 TMEM191BP0C7N4 346 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 ZNF883P0CG24 379 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 MCF2P10911 925 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 PRF1P14222 555 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 TYMPP19971 482 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 ANXA13P27216 316 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 ACSL1P33121 698 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 TNFRSF4P43489 277 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 PNLIPRP1P54315 467 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 RIPPLY3P57055 190 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 GAD2Q05329 585 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 GRAMD1BQ3KR37 738 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 POM121L1PQ3SYA9 428 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 TUBB8Q3ZCM7 444 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 GALNTL6Q49A17 601 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 C9orf57Q5W0N0 161 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 DGAT2L7PQ6IED9 249 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 INO80CQ6PI98 192 aaPredicted RBP4.3□□□□□ -1.72
CBX5-203ENST00000547872 ALKAL1Q6UXT8 129 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 VASH2Q86V25 355 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 TICAM2Q86XR7 235 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 TMEM25Q86YD3 366 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 DCP1BQ8IZD4 617 aaKnown RBP4.3□□□□□ -1.72
CBX5-203ENST00000547872 SORCS1Q8WY21 1168 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 CCT6BQ92526 530 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 IGSF8Q969P0 613 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 WBP2Q969T9 261 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 HMCESQ96FZ2 354 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 JAKMIP1Q96N16 626 aaKnown RBP4.3□□□□□ -1.72
CBX5-203ENST00000547872 FCRL4Q96PJ5 515 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 TRMOQ9BU70 441 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 BBS2Q9BXC9 721 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 RWDD1Q9H446 243 aaPredicted RBP4.3□□□□□ -1.72
CBX5-203ENST00000547872 TMEM206Q9H813 350 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 SEPSECSQ9HD40 501 aaKnown RBP4.3□□□□□ -1.72
CBX5-203ENST00000547872 WSB2Q9NYS7 404 aaPredicted RBP4.3□□□□□ -1.72
CBX5-203ENST00000547872 GCNT4Q9P109 453 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 PLEKHB1Q9UF11 243 aaPredicted RBP4.3□□□□□ -1.72
CBX5-203ENST00000547872 GTF3C4Q9UKN8 822 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 ARHGAP26Q9UNA1 814 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 HS3ST3B1Q9Y662 390 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 STON1Q9Y6Q2 735 aa4.3□□□□□ -1.72
CBX5-203ENST00000547872 URB1O60287 2271 aaKnown RBP4.3□□□□□ -1.72
CBX5-203ENST00000547872 ZFC3H1O60293 1989 aaKnown RBP4.29□□□□□ -1.72
CBX5-203ENST00000547872 ANAPC1Q9H1A4 1944 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 PCNX2A6NKB5 2137 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 H0Y3Z8 333 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 SLC9A3R1O14745 358 aaPredicted RBP4.29□□□□□ -1.72
CBX5-203ENST00000547872 CLDN3O15551 220 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 PRPF4O43172 522 aaKnown RBP eCLIP4.29□□□□□ -1.72
CBX5-203ENST00000547872 KALRNO60229 2985 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 ATP2C2O75185 946 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 NOL4O94818 638 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 HEXIM1O94992 359 aaKnown RBP4.29□□□□□ -1.72
CBX5-203ENST00000547872 AFPP02771 609 aaKnown RBP4.29□□□□□ -1.72
CBX5-203ENST00000547872 CYP11B2P19099 503 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 BDNFP23560 247 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 PRKCHP24723 683 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 RBMS1P29558 406 aaKnown RBP4.29□□□□□ -1.72
CBX5-203ENST00000547872 CCT6AP40227 531 aaKnown RBP4.29□□□□□ -1.72
CBX5-203ENST00000547872 UQCRFS1P47985 274 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 ME1P48163 572 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 NUMBP49757 651 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 TAF6P49848 677 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 LIG4P49917 911 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 EFNA5P52803 228 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 CDH8P55286 799 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 B4GALNT1Q00973 533 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 MYL7Q01449 175 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 ST3GAL1Q11201 340 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 GALNT3Q14435 633 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 PDIA5Q14554 519 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 TMEM132DQ14C87 1099 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 TGIF1Q15583 401 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 LINC00303Q3SY05 128 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 XKR4Q5GH76 650 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 ISM2Q6H9L7 571 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 ERAP2Q6P179 960 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms