RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-211	ENST00000546304	FASTKD1	Q53R41	847 aa	Known RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	SPANXN3	Q5MJ09	141 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	RNF187	Q5TA31	235 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	CRTC3	Q6UUV7	619 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	ENPP7	Q6UWV6	458 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	UNC5A	Q6ZN44	842 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	CEP128	Q6ZU80	1094 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	MARK2	Q7KZI7	788 aa	Known RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	TAS2R42	Q7RTR8	314 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	CDH24	Q86UP0	819 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	KCNMB4	Q86W47	210 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	SERPINA9	Q86WD7	417 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	GALNT13	Q8IUC8	556 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	TRAPPC5	Q8IUR0	188 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	PHACTR4	Q8IZ21	702 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	RBFA	Q8N0V3	343 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	DCLK2	Q8N568	766 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	MINDY1	Q8N5J2	469 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	GOLM1	Q8NBJ4	401 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	ZNF548	Q8NEK5	533 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	OR2I1P	Q8NGU4	316 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	OR4L1	Q8NH43	312 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	GSDMB	Q8TAX9	411 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	PIWIL2	Q8TC59	973 aa	Known RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	ZNF398	Q8TD17	642 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	PYROXD1	Q8WU10	500 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	CERS2	Q96G23	380 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	SGSM3	Q96HU1	749 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	FCRL3	Q96P31	734 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	OR2M4	Q96R27	311 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	ELF4	Q99607	663 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	COPS8	Q99627	209 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	FAM167B	Q9BTA0	163 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	LRRC61	Q9BV99	259 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	OR2AG1	Q9H205	316 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	ANKZF1	Q9H8Y5	726 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	CARS2	Q9HA77	564 aa	Known RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	UGT1A7	Q9HAW7	530 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	UGT1A10	Q9HAW8	530 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	UGT1A8	Q9HAW9	530 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	PLAC1	Q9HBJ0	212 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	RRAGD	Q9NQL2	400 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	MARCH4	Q9P2E8	410 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	PNMA8B	Q9ULN7	279 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	NFU1	Q9UMS0	254 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	SUFU	Q9UMX1	484 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	DGKB	Q9Y6T7	804 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304		V9GYY5	206 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	RP1	P56715	2156 aa		6.24	□□□□□ -1.41
PRKDC-211	ENST00000546304	CEP295	Q9C0D2	2601 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	CACNA1A	O00555	2505 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304		A0A1B0GTQ1	180 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	SCAMP1	O15126	338 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	CD3EAP	O15446	510 aa	Known RBP	6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	VEGFD	O43915	354 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	NUAK1	O60285	661 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	DFNA5	O60443	496 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	SDC3	O75056	442 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	DNAJC6	O75061	913 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	SPAG6	O75602	509 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	PIAS2	O75928	621 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	ASMTL	O95671	621 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	CSF2	P04141	144 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	ZNF883	P0CG24	379 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	MYBL2	P10244	700 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	RALB	P11234	206 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	ZNF8	P17098	575 aa	Predicted RBP	6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	MSH3	P20585	1137 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	TGM1	P22735	817 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	PML	P29590	882 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	SLC1A2	P43004	574 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	MAGEA4	P43358	317 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	GNPDA1	P46926	289 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	POLD2	P49005	469 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	TTPA	P49638	278 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	PRLHR	P49683	370 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	CDKN1C	P49918	316 aa	Predicted RBP	6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	BLK	P51451	505 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	HK3	P52790	923 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	CTSC	P53634	463 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	HNRNPK	P61978	463 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	TUBB4B	P68371	445 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	B4GALNT1	Q00973	533 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	IL9R	Q01113	521 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	THOC5	Q13769	683 aa	Known RBP	6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	FRG1	Q14331	258 aa	Known RBP	6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	SEMA3A	Q14563	771 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	TCEA2	Q15560	299 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	ZNF542P	Q5EBM4	170 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	ZNF648	Q5T619	568 aa	Predicted RBP	6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	LYPLAL1	Q5VWZ2	237 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	MRNIP	Q6NTE8	343 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	NEPRO	Q6NW34	567 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	TRMT10B	Q6PF06	316 aa	Known RBP	6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	PACS1	Q6VY07	963 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	CERS6	Q6ZMG9	384 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	REC114	Q7Z4M0	266 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	ADGRG6	Q86SQ4	1221 aa		6.23	□□□□□ -1.41
PRKDC-211	ENST00000546304	CILP2	Q8IUL8	1156 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms