RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 DNPEPQ9ULA0 475 aa14.85□□□□□ -0.03
CLSTN3-216ENST00000545663 ZNF835Q9Y2P0 537 aa14.85□□□□□ -0.03
CLSTN3-216ENST00000545663 GSAPA4D1B5 854 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 POP7O75817 140 aaKnown RBP14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 OR2B3O76000 313 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 UNGP13051 313 aaPredicted RBP14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 HLA-DPA1P20036 260 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 UGT1A4P22310 534 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 TPM4P67936 248 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 TMPRSS15P98073 1019 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 CDR2Q01850 454 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 MYL5Q02045 173 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 ERMARDQ5T6L9 678 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 AMZ2Q86W34 360 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 SPPL2CQ8IUH8 684 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 GPR135Q8IZ08 494 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 TRAM1L1Q8N609 369 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 ANKRD20A12PQ8NF67 263 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 NINJ1Q92982 152 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 ZSCAN5AQ9BUG6 496 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 AP1M1Q9BXS5 423 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.84□□□□□ -0.037e-6■■■■□ 19.6
CLSTN3-216ENST00000545663 WWP1Q9H0M0 922 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 DEF6Q9H4E7 631 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 PCDH9Q9HC56 1237 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 PTGFRNQ9P2B2 879 aa14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 LUC7L2Q9Y383 392 aaKnown RBP14.84□□□□□ -0.03
CLSTN3-216ENST00000545663 C17orf113A0A1B0GUU1 675 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 DYTNA2CJ06 578 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 GFPT2O94808 682 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 SLC4A1P02730 911 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 CD63P08962 238 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 PIRTP0C851 137 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 AMPD1P23109 780 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 NIPAL4Q0D2K0 466 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 TMEM115Q12893 351 aaPredicted RBP14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 TUBB8Q3ZCM7 444 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 KLHDC7AQ5VTJ3 777 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 CYP4V2Q6ZWL3 525 aaPredicted RBP14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 TEX26Q8N6G2 289 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 ZNF655Q8N720 491 aaPredicted RBP14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 AMER2Q8N7J2 671 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 WFDC11Q8NEX6 87 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 OR11G2Q8NGC1 345 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 TEKT4Q8WW24 435 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 PSMF1Q92530 271 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 MAGED4Q96JG8 741 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 PITPNM3Q9BZ71 974 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 TSPAN10Q9H1Z9 355 aaPredicted RBP14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 KIR3DX1Q9H7L2 352 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 ZFYVE1Q9HBF4 777 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 ST6GALNAC2Q9UJ37 374 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 SHOC2Q9UQ13 582 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 PLEKHA6Q9Y2H5 1048 aa14.83□□□□□ -0.04
CLSTN3-216ENST00000545663 ZANQ9Y493 2812 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 F8VZ95 297 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 BTN3A3O00478 584 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 ADAM10O14672 748 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 PRAMEF2O60811 474 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 TPM2P07951 284 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 ITGAXP20702 1163 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 PCSK6P29122 969 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 ZNF165P49910 485 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 CTSCP53634 463 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 GSCP56915 257 aaPredicted RBP14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 PRKAA1Q13131 559 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 PPP1R15BQ5SWA1 713 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 DNAJC24Q6P3W2 148 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 Q6ZPB1 254 aaPredicted RBP14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 ATPAF2Q8N5M1 289 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 ARRDC2Q8TBH0 407 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 PROKR1Q8TCW9 393 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 AGAP11Q8TF27 550 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 NSMCE1Q8WV22 266 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 ZFPM2Q8WW38 1151 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 HAS2Q92819 552 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 C18orf12Q96KH6 178 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 C12orf66Q96MD2 445 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 POLR1EQ9GZS1 481 aaKnown RBP14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 SOX17Q9H6I2 414 aaPredicted RBP14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 ZNF160Q9HCG1 818 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 DNAJB12Q9NXW2 375 aaKnown RBP14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 AP1M2Q9Y6Q5 423 aa14.82□□□□□ -0.04
CLSTN3-216ENST00000545663 NKX2-6A6NCS4 301 aa14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 PROM1O43490 865 aa14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 EEF1GP26641 437 aaKnown RBP14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 PBLDP30039 288 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 ADSLP30566 484 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 SOX11P35716 441 aa14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 NSFP46459 744 aaKnown RBP14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 CDH6P55285 790 aa14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 DMPKQ09013 629 aa14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 ZIC1Q15915 447 aa14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 ZNF677Q86XU0 584 aa14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 DMRTC2Q8IXT2 367 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 SIRT6Q8N6T7 355 aa14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 RASGEF1AQ8N9B8 481 aa14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 BRIX1Q8TDN6 353 aaKnown RBP14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 NAT14Q8WUY8 206 aa14.81□□□□□ -0.04
CLSTN3-216ENST00000545663 NACC2Q96BF6 587 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms