RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ZNF658BQ4V348 819 aaPredicted RBP14.25□□□□□ -0.13
RTN3-214ENST00000545432 TEX44Q53QW1 395 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 SLC9A4Q6AI14 798 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 VSIG1Q86XK7 387 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 CPNE8Q86YQ8 564 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 SPATA22Q8NHS9 363 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 PROKR1Q8TCW9 393 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 OLFM3Q96PB7 478 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 CCM2Q9BSQ5 444 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 GLOD4Q9HC38 313 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 PTRH2Q9Y3E5 179 aaKnown RBP14.25□□□□□ -0.13
RTN3-214ENST00000545432 HEBP2Q9Y5Z4 205 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 PCM1Q15154 2024 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 DOCK10Q96BY6 2186 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 AGAP14A8MT82 685 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 GPR39O43194 453 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 SKILP12757 684 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 KDELR1P24390 212 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 GCGRP47871 477 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 LMAN1P49257 510 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 TAS2R40P59535 323 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 DCDP81605 110 aaKnown RBP14.24□□□□□ -0.13
RTN3-214ENST00000545432 OTUD4Q01804 1114 aaKnown RBP14.24□□□□□ -0.13
RTN3-214ENST00000545432 ITGA9Q13797 1035 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 ZNF169Q14929 603 aaPredicted RBP14.24□□□□□ -0.13
RTN3-214ENST00000545432 FAM182AQ5T1J6 154 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 MLIPQ5VWP3 458 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 CCDC70Q6NSX1 233 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 KDELC1Q6UW63 502 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 GDF7Q7Z4P5 450 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 TMEM151BQ8IW70 566 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 ADGRF3Q8IZF5 1079 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 DNAJB14Q8TBM8 379 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 ITLN2Q8WWU7 325 aaPredicted RBP14.24□□□□□ -0.13
RTN3-214ENST00000545432 AP1M1Q9BXS5 423 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 FAM60AQ9NP50 221 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 SLC22A11Q9NSA0 550 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 HACD3Q9P035 362 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 CELSR1Q9NYQ6 3014 aa14.24□□□□□ -0.13
RTN3-214ENST00000545432 GLYATL1P3A0A0U1RQE8 302 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 C17orf113A0A1B0GUU1 675 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 BTN3A1O00481 513 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 PROSCO94903 275 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 SLC4A1P02730 911 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 MMP11P24347 488 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 TDGF1P3P51864 188 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 PCSK7Q16549 785 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 HIF1AQ16665 826 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 ZNF630Q2M218 657 aaPredicted RBP14.23□□□□□ -0.13
RTN3-214ENST00000545432 FNBP1LQ5T0N5 605 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 PRAMEF13Q5VWM6 474 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 SPNS3Q6ZMD2 512 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 LCN9Q8WX39 176 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 RAPGEF5Q92565 580 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 TEKT5Q96M29 485 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 ZNF830Q96NB3 372 aaPredicted RBP14.23□□□□□ -0.13
RTN3-214ENST00000545432 SRMSQ9H3Y6 488 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 ENAMQ9NRM1 1142 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 CCDC88CQ9P219 2028 aa14.23□□□□□ -0.13
RTN3-214ENST00000545432 CCDC66A2RUB6 948 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 C3orf70A6NLC5 250 aaPredicted RBP14.22□□□□□ -0.13
RTN3-214ENST00000545432 PCDH17O14917 1159 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 MAP3K7O43318 606 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 HCRTR1O43613 425 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 SLC35G4P0C7Q5 338 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 PVRP15151 417 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 CD68P34810 354 aaPredicted RBP14.22□□□□□ -0.13
RTN3-214ENST00000545432 CD151P48509 253 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 PDK1Q15118 436 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 TLR1Q15399 786 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 ZIC1Q15915 447 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 PPP2R5EQ16537 467 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 NKAIN1Q4KMZ8 207 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 FIGNQ5HY92 759 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 AGAP7PQ5VUJ5 663 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 FAM151BQ6UXP7 276 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 BNC2Q6ZN30 1099 aaPredicted RBP14.22□□□□□ -0.13
RTN3-214ENST00000545432 FJX1Q86VR8 437 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 GPR135Q8IZ08 494 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 LILRA3Q8N6C8 439 aaPredicted RBP14.22□□□□□ -0.13
RTN3-214ENST00000545432 ZNF398Q8TD17 642 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 AGAP4Q96P64 663 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 LMF1Q96S06 567 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 CEP41Q9BYV8 373 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 TRIM8Q9BZR9 551 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 SLC7A5P2Q9GIP4 190 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 SPRTNQ9H040 489 aaPredicted RBP14.22□□□□□ -0.13
RTN3-214ENST00000545432 OR52A5Q9H2C5 316 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 SLC6A20Q9NP91 592 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 CHST11Q9NPF2 352 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 ANO10Q9NW15 660 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 IFT80Q9P2H3 777 aaPredicted RBP14.22□□□□□ -0.13
RTN3-214ENST00000545432 FAM153AQ9UHL3 310 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 NENFQ9UMX5 172 aa14.22□□□□□ -0.13
RTN3-214ENST00000545432 C2orf74A8MZ97 194 aa14.21□□□□□ -0.13
RTN3-214ENST00000545432 SOCS6O14544 535 aa14.21□□□□□ -0.13
RTN3-214ENST00000545432 JRKO75564 520 aa14.21□□□□□ -0.13
RTN3-214ENST00000545432 ALBP02768 609 aa14.21□□□□□ -0.13
RTN3-214ENST00000545432 MSH3P20585 1137 aa14.21□□□□□ -0.13
RTN3-214ENST00000545432 AP1B1Q10567 949 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms