RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 MED8Q96G25 268 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 PPM1MQ96MI6 270 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 CD180Q99467 661 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 SPRY4Q9C004 299 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 OR52A5Q9H2C5 316 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 XKR8Q9H6D3 395 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 MVB12BQ9H7P6 319 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 ASF1AQ9Y294 204 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 TDRKHQ9Y2W6 561 aaKnown RBP12.81□□□□□ -0.36
CIT-214ENST00000544588 RPS6KL1Q9Y6S9 549 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 COL27A1Q8IZC6 1860 aaPredicted RBP12.8□□□□□ -0.36
CIT-214ENST00000544588 LIN7AO14910 233 aaPredicted RBP12.8□□□□□ -0.36
CIT-214ENST00000544588 MAP3K7O43318 606 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 ZBTB11O95625 1053 aaPredicted RBP12.8□□□□□ -0.36
CIT-214ENST00000544588 DLGAP3O95886 979 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 NTRK1P04629 796 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 ITGB2P05107 769 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 GSTM1P09488 218 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 FAM87AP0C7U9 286 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 FGF5P12034 268 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 DLSTP36957 453 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 NPY2RP49146 381 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 KPNA2P52292 529 aaKnown RBP12.8□□□□□ -0.36
CIT-214ENST00000544588 GSTM4Q03013 218 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 LINC00303Q3SY05 128 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 AMIGO1Q86WK6 493 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 KMT5CQ86Y97 462 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 OR52E1Q8NGJ3 308 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 MS4A14Q96JA4 679 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 SLC41A2Q96JW4 573 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 NRTNQ99748 197 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 TSSK1BQ9BXA7 367 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 SLC12A9Q9BXP2 914 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 AP1M1Q9BXS5 423 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 KLHL25Q9H0H3 589 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 FGF21Q9NSA1 209 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 CATSPERZQ9NTU4 200 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 TRMT1Q9NXH9 659 aaKnown RBP12.8□□□□□ -0.36
CIT-214ENST00000544588 IL17BQ9UHF5 180 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 RIMKLBQ9ULI2 386 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 JRKLQ9Y4A0 524 aa12.8□□□□□ -0.36
CIT-214ENST00000544588 SLC9B1P1A6NJY1 282 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 AP3B1O00203 1094 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 BTN3A3O00478 584 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 TIAF1O95411 115 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 KRT14P02533 472 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 TCN2P20062 427 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 PSMA3P25788 255 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 MGAT1P26572 445 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 SARNPP82979 210 aaKnown RBP12.79□□□□□ -0.36
CIT-214ENST00000544588 PLOD1Q02809 727 aaPredicted RBP12.79□□□□□ -0.36
CIT-214ENST00000544588 HSPA14Q0VDF9 509 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 NFATC3Q12968 1075 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 GPS1Q13098 491 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 GPR19Q15760 415 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.79□□□□□ -0.36
CIT-214ENST00000544588 AARS2Q5JTZ9 985 aaKnown RBP12.79□□□□□ -0.36
CIT-214ENST00000544588 PTRHD1Q6GMV3 140 aaKnown RBP12.79□□□□□ -0.36
CIT-214ENST00000544588 PWWP2BQ6NUJ5 590 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 CASC4Q6P4E1 433 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 CES3Q6UWW8 571 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 PACS1Q6VY07 963 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 ZNF534Q76KX8 674 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 PRELID2Q8N945 189 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 EXD3Q8N9H8 876 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 OR5AR1Q8NGP9 310 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 CFAP61Q8NHU2 1237 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 STARD8Q92502 1023 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 ANP32BQ92688 251 aaKnown RBP12.79□□□□□ -0.36
CIT-214ENST00000544588 SLC45A3Q96JT2 553 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 PBKQ96KB5 322 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 IL22Q9GZX6 179 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 EIF2B3Q9NR50 452 aaKnown RBP12.79□□□□□ -0.36
CIT-214ENST00000544588 CROTQ9UKG9 612 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 PADI1Q9ULC6 663 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 PCDHB3Q9Y5E6 796 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 MRPS18BQ9Y676 258 aaKnown RBP12.79□□□□□ -0.36
CIT-214ENST00000544588 ITPR1Q14643 2758 aa12.79□□□□□ -0.36
CIT-214ENST00000544588 IQCF5A8MTL0 148 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 MATN2O00339 956 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 BTN3A1O00481 513 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 CD3EAPO15446 510 aaKnown RBP12.78□□□□□ -0.36
CIT-214ENST00000544588 ZSCAN12O43309 604 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 NDUFS3O75489 264 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 MT-ND3P03897 115 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 NMBRP28336 390 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 PRDX3P30048 256 aaKnown RBP12.78□□□□□ -0.36
CIT-214ENST00000544588 STAT5AP42229 794 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 MC1RQ01726 317 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 ABRQ12979 859 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 MAP7Q14244 749 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 SEMA3AQ14563 771 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 DEFB109BQ30KR1 87 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 ZNF658BQ4V348 819 aaPredicted RBP12.78□□□□□ -0.36
CIT-214ENST00000544588 BORAQ6PGQ7 559 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 BPHLQ86WA6 291 aaPredicted RBP12.78□□□□□ -0.36
CIT-214ENST00000544588 TMEM126BQ8IUX1 230 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 KRT222Q8N1A0 295 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 SLC35F6Q8N357 371 aa12.78□□□□□ -0.36
CIT-214ENST00000544588 D2HGDHQ8N465 521 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms