RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 NEK2P51955 445 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 HMGCS1Q01581 520 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 TSTA3Q13630 321 aaPredicted RBP13.39□□□□□ -0.27
HCFC2-202ENST00000544223 FASTKQ14296 549 aaKnown RBP13.39□□□□□ -0.27
HCFC2-202ENST00000544223 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.39□□□□□ -0.27
HCFC2-202ENST00000544223 METTL21CQ5VZV1 264 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 FUNDC1Q8IVP5 155 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 ZNF547Q8IVP9 402 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 CFAP206Q8IYR0 622 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 HDDC3Q8N4P3 179 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 OR56A4Q8NGH8 313 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 UCMAQ8WVF2 138 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 ASB11Q8WXH4 323 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 ULK4Q96C45 1275 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 MSLNLQ96KJ4 702 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 TUBB6Q9BUF5 446 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 LOC730098B7Z3J9 87 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 PSMD12O00232 456 aaPredicted RBP13.39□□□□□ -0.27
HCFC2-202ENST00000544223 FBP2O00757 339 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 NARSO43776 548 aaKnown RBP13.39□□□□□ -0.27
HCFC2-202ENST00000544223 ZNF8P17098 575 aaPredicted RBP13.39□□□□□ -0.27
HCFC2-202ENST00000544223 EPORP19235 508 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 KIR2DL1P43626 348 aaPredicted RBP13.39□□□□□ -0.27
HCFC2-202ENST00000544223 CCNG1P51959 295 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 TRAF3Q13114 568 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 CST6Q15828 149 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 CPSF6Q16630 551 aaKnown RBP eCLIP13.39□□□□□ -0.27
HCFC2-202ENST00000544223 TTLL9Q3SXZ7 439 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 SYTL3Q4VX76 610 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 AGBL4Q5VU57 503 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 PDPRQ8NCN5 879 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 CCDC28BQ9BUN5 200 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 CD244Q9BZW8 370 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 PSMD13Q9UNM6 376 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 SORCS3Q9UPU3 1222 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 SLC22A14Q9Y267 594 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 ANGPTL3Q9Y5C1 460 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 FADS3Q9Y5Q0 445 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 WDFY3Q8IZQ1 3526 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 C2CD4DB7Z1M9 353 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 PRAMEF4O60810 478 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 ADAM23O75077 832 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 FGF4P08620 206 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 GGT5P36269 586 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 PTPN5P54829 565 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 INHBCP55103 352 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 DCDC1P59894 354 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 PLIN5Q00G26 463 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 TBL3Q12788 808 aaKnown RBP13.38□□□□□ -0.27
HCFC2-202ENST00000544223 HTR4Q13639 388 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 COL9A2Q14055 689 aaPredicted RBP13.38□□□□□ -0.27
HCFC2-202ENST00000544223 NFE2L1Q14494 772 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 VPS26BQ4G0F5 336 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 TMEM196Q5HYL7 178 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 PRAMEF9Q5VWM5 478 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 Q6ZSR9 355 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 CHSY3Q70JA7 882 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 MILR1Q7Z6M3 343 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 ADGRG6Q86SQ4 1221 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 DSELQ8IZU8 1212 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 CPSF7Q8N684 471 aaKnown RBP13.38□□□□□ -0.27
HCFC2-202ENST00000544223 SMRP1Q8NCR6 262 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 FLCNQ8NFG4 579 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 ACTRT2Q8TDY3 377 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 CXorf40AQ8TE69 158 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 OPTCQ9UBM4 332 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 ARHGEF33A8MVX0 844 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 GIPC1O14908 333 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 TM7SF2O76062 418 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 FGL2Q14314 439 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 TBCCQ15814 346 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 PTCHD3Q3KNS1 767 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 ADNP2Q6IQ32 1131 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 NEK5Q6P3R8 708 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 FAM83HQ6ZRV2 1179 aaPredicted RBP13.38□□□□□ -0.27
HCFC2-202ENST00000544223 SLC22A15Q8IZD6 547 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 AFAP1L2Q8N4X5 818 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 VPS33AQ96AX1 596 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 RIPOR3Q96MK2 946 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 CDRT15Q96T59 188 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 SMOXQ9NWM0 555 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 KLQ9UEF7 1012 aa13.38□□□□□ -0.27
HCFC2-202ENST00000544223 CKAP5Q14008 2032 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 GRXCR2A6NFK2 248 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 CFAP99D6REC4 459 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 NR5A2O00482 541 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 WDR47O94967 919 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 RPL10P27635 214 aaKnown RBP13.37□□□□□ -0.27
HCFC2-202ENST00000544223 PCBP2Q15366 365 aaKnown RBP eCLIP13.37□□□□□ -0.27
HCFC2-202ENST00000544223 C1orf146Q5VVC0 180 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 ZDHHC20Q5W0Z9 365 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 XKR5Q6UX68 686 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 SFRP1Q8N474 314 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 IL17RCQ8NAC3 791 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 CSGALNACT1Q8TDX6 532 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 MED8Q96G25 268 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 PPP1R16AQ96I34 528 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 FAR2Q96K12 515 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 C1QTNF3Q9BXJ4 246 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 SLC23A2Q9UGH3 650 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms