RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TRPV4Q9HBA0 871 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 BRD7Q9NPI1 651 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 NARSO43776 548 aaKnown RBP15.22■□□□□ 0.03
CHD4-210ENST00000544040 COL6A2P12110 1019 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 FAM174BQ3ZCQ3 159 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 RAB12Q6IQ22 244 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 APOBEC3HQ6NTF7 200 aaKnown RBP15.22■□□□□ 0.03
CHD4-210ENST00000544040 ZNF662Q6ZS27 426 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 SRFBP1Q8NEF9 429 aaKnown RBP15.22■□□□□ 0.03
CHD4-210ENST00000544040 METTL21AQ8WXB1 218 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 PTCH2Q9Y6C5 1203 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 L7N2F9 121 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 PDCD5O14737 125 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 NOL4O94818 638 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 HOXB6P17509 224 aaKnown RBP15.22■□□□□ 0.03
CHD4-210ENST00000544040 CPN2P22792 545 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 PRKCHP24723 683 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 VARSP26640 1264 aaKnown RBP15.22■□□□□ 0.03
CHD4-210ENST00000544040 VAMP2P63027 116 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 IFI44LQ53G44 452 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 LRRC69Q6ZNQ3 347 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 SGCDQ92629 289 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 SLC39A3Q9BRY0 314 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 YIPF4Q9BSR8 244 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 PAK6Q9NQU5 681 aaPredicted RBP15.22■□□□□ 0.03
CHD4-210ENST00000544040 MEMO1Q9Y316 297 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 ZFP37Q9Y6Q3 630 aaPredicted RBP15.22■□□□□ 0.03
CHD4-210ENST00000544040 CXCL14O95715 111 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 OR1D2P34982 312 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 PDX1P52945 283 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 PLD5Q8N7P1 536 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 ANKFN1Q8N957 763 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 RASGEF1AQ8N9B8 481 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 IRF2BPLQ9H1B7 796 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 FCF1Q9Y324 198 aaKnown RBP15.22■□□□□ 0.03
CHD4-210ENST00000544040 SMCO3A2RU48 225 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 ADH1CP00326 375 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 SLC9B1Q4ZJI4 515 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 ZNF311Q5JNZ3 666 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 VSIG10LQ86VR7 867 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 NAXEQ8NCW5 288 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 STYXQ8WUJ0 223 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 SLC22A4Q9H015 551 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 MANSC4A6NHS7 340 aaPredicted RBP15.21■□□□□ 0.03
CHD4-210ENST00000544040 RNASEH2AO75792 299 aaKnown RBP15.21■□□□□ 0.03
CHD4-210ENST00000544040 RIOX2Q8IUF8 465 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 TMEM192Q8IY95 271 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 IQCKQ8N0W5 287 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 FBXL16Q8N461 479 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 MCCC1Q96RQ3 725 aaPredicted RBP15.21■□□□□ 0.03
CHD4-210ENST00000544040 ZNF471Q9BX82 626 aaPredicted RBP15.21■□□□□ 0.03
CHD4-210ENST00000544040 CCDC177Q9NQR7 707 aaPredicted RBP15.21■□□□□ 0.03
CHD4-210ENST00000544040 TCAF1Q9Y4C2 921 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 PCDHGC4Q9Y5F7 938 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 IQGAP3Q86VI3 1631 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 SPATA31A5Q5VU36 1347 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 SPATA31A7Q8IWB4 1347 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 JCADQ9P266 1359 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 METTL21EPA6NDL7 271 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 MT-CYBP00156 380 aaPredicted RBP15.21■□□□□ 0.03
CHD4-210ENST00000544040 GRK6P43250 576 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 IRF9Q00978 393 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 PCBP2Q15366 365 aaKnown RBP eCLIP15.21■□□□□ 0.03
CHD4-210ENST00000544040 GET4Q7L5D6 327 aaPredicted RBP15.21■□□□□ 0.03
CHD4-210ENST00000544040 MON1AQ86VX9 555 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 TOP6BLQ8N6T0 577 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 GRHL3Q8TE85 626 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 HMCESQ96FZ2 354 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 CDK15Q96Q40 435 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 TMED9Q9BVK6 235 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 PTPRJQ12913 1337 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 TGFB1I1O43294 461 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 ADH1AP07327 375 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 F7P08709 466 aaPredicted RBP15.21■□□□□ 0.03
CHD4-210ENST00000544040 HSD3B2P26439 372 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 CMPK1P30085 196 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 LIMK2P53671 638 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 SEC13P55735 322 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 LRRC73Q5JTD7 316 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 KLHDC10Q6PID8 442 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 CHST9Q7L1S5 443 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 SYNPOQ8N3V7 929 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 FIBCD1Q8N539 461 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 FGFBP2Q9BYJ0 223 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 PTTG2Q9NZH5 202 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 TIMM8BQ9Y5J9 83 aaPredicted RBP15.21■□□□□ 0.03
CHD4-210ENST00000544040 TCAF2A6NFQ2 919 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 SRCP12931 536 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 IL7RP16871 459 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 PRDX6P30041 224 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 PLA2G16P53816 162 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 SERPINA9Q86WD7 417 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 DENND6BQ8NEG7 585 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 SLC35G5Q96KT7 338 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 DHX33Q9H6R0 707 aaKnown RBP15.21■□□□□ 0.03
CHD4-210ENST00000544040 POMPQ9Y244 141 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 UBIAD1Q9Y5Z9 338 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 GRIN2DO15399 1336 aa15.21■□□□□ 0.03
CHD4-210ENST00000544040 SLC35F4A4IF30 521 aa15.21■□□□□ 0.02
CHD4-210ENST00000544040 C5orf60A6NFR6 353 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms