RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 GDF5P43026 501 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 MNAT1P51948 309 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 GSTM4Q03013 218 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 TRAF3Q13114 568 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 GTF2H3Q13889 308 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 CYB5D1Q6P9G0 228 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 SLC22A15Q8IZD6 547 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 TCAIMQ8N3R3 496 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 LILRA3Q8N6C8 439 aaPredicted RBP19.4■□□□□ 0.7
COPS7A-218ENST00000543939 HIST1H2AHQ96KK5 128 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 LINC00615Q96LM1 132 aaPredicted RBP19.4■□□□□ 0.7
COPS7A-218ENST00000543939 HIST1H2AJQ99878 128 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 H2AFJQ9BTM1 129 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 PHF7Q9BWX1 381 aaPredicted RBP19.4■□□□□ 0.7
COPS7A-218ENST00000543939 SLC6A17Q9H1V8 727 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 AKTIPQ9H8T0 292 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 FAM8A1Q9UBU6 413 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 GPR34Q9UPC5 381 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 ZFR2Q9UPR6 939 aaKnown RBP19.4■□□□□ 0.7
COPS7A-218ENST00000543939 COLQQ9Y215 455 aaPredicted RBP19.4■□□□□ 0.7
COPS7A-218ENST00000543939 BTRCQ9Y297 605 aa19.4■□□□□ 0.7
COPS7A-218ENST00000543939 UBDO15205 165 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 PLRG1O43660 514 aaKnown RBP19.39■□□□□ 0.7
COPS7A-218ENST00000543939 PSIP1O75475 530 aaKnown RBP19.39■□□□□ 0.7
COPS7A-218ENST00000543939 STK16O75716 305 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 OTCP00480 354 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 DNTTP04053 509 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 PCCBP05166 539 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 C7P10643 843 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 GLULP15104 373 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 ZNF8P17098 575 aaPredicted RBP19.39■□□□□ 0.7
COPS7A-218ENST00000543939 PBLDP30039 288 aaPredicted RBP19.39■□□□□ 0.7
COPS7A-218ENST00000543939 PREPP48147 710 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 RGS19P49795 217 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 AP1S2P56377 157 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 HEATR4Q86WZ0 1026 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 TRAPPC5Q8IUR0 188 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 ZNF547Q8IVP9 402 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 DDIASQ8IXT1 998 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 MCOLN3Q8TDD5 553 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 CDK15Q96Q40 435 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 MRGBPQ9NV56 204 aa19.39■□□□□ 0.7
COPS7A-218ENST00000543939 LOC100653049A0A140TA62 436 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 SHISA7A6NL88 538 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 SOX1O00570 391 aaPredicted RBP19.39■□□□□ 0.69
COPS7A-218ENST00000543939 LIN7AO14910 233 aaPredicted RBP19.39■□□□□ 0.69
COPS7A-218ENST00000543939 KRT34O76011 436 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 ASGR2P07307 311 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 LINC00032P0C843 101 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 CD1EP15812 388 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 CPOXP36551 454 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 HNMTP50135 292 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 ABRQ12979 859 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 FGL2Q14314 439 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 HERC3Q15034 1050 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 ZXDCQ2QGD7 858 aaPredicted RBP19.39■□□□□ 0.69
COPS7A-218ENST00000543939 XKR5Q6UX68 686 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 CDYL2Q8N8U2 506 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 OR4F6Q8NGB9 312 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 GANCQ8TET4 914 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 C1QTNF2Q9BXJ5 285 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 ANGPTL3Q9Y5C1 460 aa19.39■□□□□ 0.69
COPS7A-218ENST00000543939 C17orf113A0A1B0GUU1 675 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 NARSO43776 548 aaKnown RBP19.38■□□□□ 0.69
COPS7A-218ENST00000543939 MGRN1O60291 552 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 VPS4BO75351 444 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 CHEK2O96017 543 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 THRAP10827 490 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 TEAD1P28347 426 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 CCNG1P51959 295 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 RPS21P63220 83 aaKnown RBP19.38■□□□□ 0.69
COPS7A-218ENST00000543939 CDK3Q00526 305 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 SQLEQ14534 574 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 NUMA1Q14980 2115 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 CCDC85BQ15834 202 aaPredicted RBP19.38■□□□□ 0.69
COPS7A-218ENST00000543939 XKR7Q5GH72 579 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 CHCHD4Q8N4Q1 142 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 DCBLD1Q8N8Z6 715 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 RP9Q8TA86 221 aaKnown RBP19.38■□□□□ 0.69
COPS7A-218ENST00000543939 ATP6V1E2Q96A05 226 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 SLC32A1Q9H598 525 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 MBNL1Q9NR56 388 aaKnown RBP19.38■□□□□ 0.69
COPS7A-218ENST00000543939 POLG2Q9UHN1 485 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 SCML1Q9UN30 329 aa19.38■□□□□ 0.69
COPS7A-218ENST00000543939 PABPN1LA6NDY0 278 aaKnown RBP19.37■□□□□ 0.69
COPS7A-218ENST00000543939 ARHGEF33A8MVX0 844 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 CAPN1P07384 714 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 EPB42P16452 691 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 PDHA2P29803 388 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 MAPK9P45984 424 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 SLC6A12P48065 614 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 PIK3CGP48736 1102 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 ATP4BP51164 291 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 DNAL1Q4LDG9 190 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 TMEM259Q4ZIN3 620 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 KIAA1161Q6NSJ0 714 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 LRRC70Q7Z2Q7 622 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 MILR1Q7Z6M3 343 aa19.37■□□□□ 0.69
COPS7A-218ENST00000543939 TP53I13Q8NBR0 393 aaPredicted RBP19.37■□□□□ 0.69
COPS7A-218ENST00000543939 OR14C36Q8NHC7 312 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms