RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 JOSD2Q8TAC2 188 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 COG1Q8WTW3 980 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 FAM172AQ8WUF8 416 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 GATAD2BQ8WXI9 593 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 N4BP2L2Q92802 583 aaPredicted RBP4.63□□□□□ -1.67
LIMS1-214ENST00000542845 PTERQ96BW5 349 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 MAGED4Q96JG8 741 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 C18orf12Q96KH6 178 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 LRFN5Q96NI6 719 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 AGAP3Q96P47 875 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 RAB33BQ9H082 229 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 CXXC4Q9H2H0 198 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 RMI1Q9H9A7 625 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 NOD2Q9HC29 1040 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 SLC6A20Q9NP91 592 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 DLL4Q9NR61 685 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 FAM207AQ9NSI2 230 aaPredicted RBP4.63□□□□□ -1.67
LIMS1-214ENST00000542845 POT1Q9NUX5 634 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 FANCLQ9NW38 375 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 TMEM51Q9NW97 253 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 TNFRSF10DQ9UBN6 386 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 CDC23Q9UJX2 597 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 TMEM59LQ9UK28 342 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 FBXL4Q9UKA2 621 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 CNOT6Q9ULM6 557 aaKnown RBP4.63□□□□□ -1.67
LIMS1-214ENST00000542845 PLEKHA6Q9Y2H5 1048 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 FHOD1Q9Y613 1164 aa4.63□□□□□ -1.67
LIMS1-214ENST00000542845 CACNA1CQ13936 2221 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 HCFC1P51610 2035 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 NCOA6Q14686 2063 aaPredicted RBP4.62□□□□□ -1.67
LIMS1-214ENST00000542845 A0A1W2PQ67 120 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 DYTNA2CJ06 578 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 SLC35F4A4IF30 521 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 NKX2-6A6NCS4 301 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 FAM90A27PA6NNH2 459 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 RNF212BA8MTL3 300 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 FADS2P1A8MWK0 482 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 WASH4PA8MWX3 477 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 E7EQ34 232 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 FOXN3O00409 490 aaPredicted RBP4.62□□□□□ -1.67
LIMS1-214ENST00000542845 KMOO15229 486 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 PMM2O15305 246 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 SOCS5O75159 536 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 MTX2O75431 263 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 SLCO2B1O94956 709 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 LY6G6DO95868 133 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 CRYABP02511 175 aaKnown RBP4.62□□□□□ -1.67
LIMS1-214ENST00000542845 PDHA1P08559 390 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 POLR2CP19387 275 aaPredicted RBP4.62□□□□□ -1.67
LIMS1-214ENST00000542845 UGT1A4P22310 534 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 ALAS2P22557 587 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 GABRB2P47870 512 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 LMAN1P49257 510 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 NDUFA8P51970 172 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 KPNA2P52292 529 aaKnown RBP4.62□□□□□ -1.67
LIMS1-214ENST00000542845 SOX8P57073 446 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 TPI1P60174 286 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 PMP22Q01453 160 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 SLC10A7Q0GE19 358 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 PNOCQ13519 176 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 KRT33BQ14525 404 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 FXNQ16595 210 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 AGAP9Q5VTM2 703 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 ALS2CLQ60I27 953 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 KLHL10Q6JEL2 608 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 IGFL2Q6UWQ7 119 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 KRBA2Q6ZNG9 492 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 CEP128Q6ZU80 1094 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 ENOSF1Q7L5Y1 443 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 BNIPLQ7Z465 357 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 LRRTM4Q86VH4 590 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 RBM12BQ8IXT5 1001 aaKnown RBP4.62□□□□□ -1.67
LIMS1-214ENST00000542845 CELF2-AS1Q8N7Q2 184 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 FAM169BQ8N8A8 192 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 MSANTD4Q8NCY6 345 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 WFDC11Q8NEX6 87 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 ANKRD20A12PQ8NF67 263 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 GPR150Q8NGU9 434 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 TEKT4Q8WW24 435 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 ZNF653Q96CK0 615 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 PWWP2AQ96N64 755 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 DNAJC7Q99615 494 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 DHRS4Q9BTZ2 278 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 SPATA16Q9BXB7 569 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 POLDIP3Q9BY77 421 aaKnown RBP4.62□□□□□ -1.67
LIMS1-214ENST00000542845 LHPPQ9H008 270 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 CARD9Q9H257 536 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 CLSTN2Q9H4D0 955 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 DEF6Q9H4E7 631 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 FAM83DQ9H4H8 585 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 LRRC19Q9H756 370 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 IMP3Q9NV31 184 aaKnown RBP4.62□□□□□ -1.67
LIMS1-214ENST00000542845 IRAK4Q9NWZ3 460 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 DTLQ9NZJ0 730 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 COQ3Q9NZJ6 369 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 PTGFRNQ9P2B2 879 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 DHCR7Q9UBM7 475 aaKnown RBP4.62□□□□□ -1.67
LIMS1-214ENST00000542845 PFDN2Q9UHV9 154 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 ST6GALNAC2Q9UJ37 374 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms