RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 HTR1EP28566 365 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 SLC16A1P53985 500 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 AP1S1P61966 158 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 TXNL4AP83876 142 aaKnown RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 CHIT1Q13231 466 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 LRP8Q14114 963 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 ACOX1Q15067 660 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 NPTX1Q15818 432 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 MEP1AQ16819 746 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 PDCD4Q53EL6 469 aaKnown RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 FUT10Q6P4F1 479 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 CYP4V2Q6ZWL3 525 aaPredicted RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 CLEC14AQ86T13 490 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 TRAPPC5Q8IUR0 188 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 CLDN19Q8N6F1 224 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 NAT16Q8N8M0 369 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 FNDC8Q8TC99 324 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 BIRC8Q96P09 236 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 PRRG3Q9BZD7 231 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 TOR3AQ9H497 397 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 NSUN3Q9H649 340 aaKnown RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 IGSF5Q9NSI5 407 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 GIN1Q9NXP7 522 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 RAB23Q9ULC3 237 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 FCF1Q9Y324 198 aaKnown RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 GMEB1Q9Y692 573 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 ZNF831Q5JPB2 1677 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 KPNA3O00505 521 aaPredicted RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 SLC22A1O15245 554 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 PRAMEF11O60813 436 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 EPORP19235 508 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 CAPN3P20807 821 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 GDF5P43026 501 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ATN1P54259 1190 aaPredicted RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 PURAQ00577 322 aaKnown RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 GK3PQ14409 553 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ATP6AP1Q15904 470 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 SETMARQ53H47 684 aaPredicted RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 SPANXN4Q5MJ08 99 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 LCN8Q6JVE9 175 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ERAP2Q6P179 960 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 KLHL35Q6PF15 583 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 MAMDC4Q6UXC1 1216 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 C11orf65Q8NCR3 313 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 STON2Q8WXE9 905 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 C8orf48Q96LL4 319 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 MYRFLQ96LU7 910 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 CCSER2Q9H7U1 834 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 BRD9Q9H8M2 597 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 AMBNQ9NP70 447 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 AASDHPPTQ9NRN7 309 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 EBF1Q9UH73 591 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ILVBLA1L0T0 632 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ANKDD1BA6NHY2 528 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 QSOX1O00391 747 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 PGLSO95336 258 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 FGF4P08620 206 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ELK4P28324 431 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 FMO3P31513 532 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 RPL3P39023 403 aaKnown RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 NSG1P42857 185 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 SRSF11Q05519 484 aaKnown RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 LAPTM5Q13571 262 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 CARTPTQ16568 116 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ATXN7L2Q5T6C5 722 aaPredicted RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ATG14Q6ZNE5 492 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 LILRA2Q8N149 483 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ZMIZ2Q8NF64 920 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ST13P5Q8NFI4 369 aaPredicted RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 KCNJ9Q92806 393 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 Q96MT0 163 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 DEPDC7Q96QD5 511 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 GSTO2Q9H4Y5 243 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 SDR39U1Q9NRG7 319 aaPredicted RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 GKN1Q9NS71 199 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 INTS7Q9NVH2 962 aaKnown RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 AIG1Q9NVV5 245 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 TMEM181Q9P2C4 612 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 NUMBLQ9Y6R0 609 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 SAGE2PA6NJ88 616 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 MAGEB17A8MXT2 336 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 TNFRSF11BO00300 401 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 PER2O15055 1255 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 CREG1O75629 220 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 TFPTP0C1Z6 253 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 TSPAN19P0C672 248 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 PRKAR2AP13861 404 aaKnown RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 GABRB3P28472 473 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ASMTP46597 345 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 HLCSP50747 726 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 TMBIM6P55061 237 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 KCNAB2Q13303 367 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 NAE1Q13564 534 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 ADGRF1Q5T601 910 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 KCTD11Q693B1 232 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 DENND5AQ6IQ26 1287 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 GDF6Q6KF10 455 aaPredicted RBP8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 OR52J3Q8NH60 311 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 L3HYPDHQ96EM0 354 aa8.06□□□□□ -1.12
PRKAB1-207ENST00000542698 RDH12Q96NR8 316 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms