RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 Q6ZNX1 250 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 GOLGA7Q7Z5G4 137 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 IFNEQ86WN2 208 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 CPNE9Q8IYJ1 553 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 STK40Q8N2I9 435 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 CDYL2Q8N8U2 506 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 FNDC5Q8NAU1 212 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 LPCAT1Q8NF37 534 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 PJA1Q8NG27 643 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 OR13F1Q8NGS4 319 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 RNF217Q8TC41 542 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 FNDC8Q8TC99 324 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 MAGEE2Q8TD90 523 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 CYGBQ8WWM9 190 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 OVCA2Q8WZ82 227 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 NSMCE2Q96MF7 247 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 COG8Q96MW5 612 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 ZNF583Q96ND8 569 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 RDH12Q96NR8 316 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 CGREF1Q99674 301 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 C19orf43Q9BQ61 176 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 ADGRE3Q9BY15 652 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 ELAC1Q9H777 363 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 TMEM161AQ9NX61 479 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 SMPD4Q9NXE4 827 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 ASIC5Q9NY37 505 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 USE1Q9NZ43 259 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 CD274Q9NZQ7 290 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 IL17CQ9P0M4 197 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 DNMT3LQ9UJW3 386 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 GABRQQ9UN88 632 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 CDC14AQ9UNH5 594 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 TMA7Q9Y2S6 64 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 ZNF711Q9Y462 761 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 PCDHB1Q9Y5F3 818 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 PCDHGC4Q9Y5F7 938 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 TNPO3Q9Y5L0 923 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 TRBV5-3A0A0A0MS03 114 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 A0A1B0GVM2 712 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 GIPC1O14908 333 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 STX7O15400 261 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 TAPBPO15533 448 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 CPNE3O75131 537 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 DEAF1O75398 565 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 RSL1D1O76021 490 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 SEC14L2O76054 403 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 SEC24DO94855 1032 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 KLKB1P03952 638 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 ANXA6P08133 673 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 RHOCP08134 193 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 MBL2P11226 248 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 PCSK2P16519 638 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 RPS3P23396 243 aaKnown RBP eCLIP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 CCND3P30281 292 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 SHMT2P34897 504 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 ATP5C1P36542 298 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 POLR2IP36954 125 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 FLT3LGP49771 235 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 ENTPD1P49961 510 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 GALK1P51570 392 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 SGSHP51688 502 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 TMBIM6P55061 237 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 ARF5P84085 180 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 CACNG1Q06432 222 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 TRAF3Q13114 568 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 DUSP4Q13115 394 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 TUBA3CQ13748 450 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 GTF2H2Q13888 395 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 RFTN2Q52LD8 501 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 RTP2Q5QGT7 225 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 CXorf57Q6NSI4 855 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 GTF2H2CQ6P1K8 395 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 METTL2BQ6P1Q9 378 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 CERS6Q6ZMG9 384 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 ZNF783Q6ZMS7 281 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 KCTD8Q6ZWB6 473 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 ADAMTSL2Q86TH1 951 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 RALGPS2Q86X27 583 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 OFCC1Q8IZS5 231 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 PCSK9Q8NBP7 692 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 ZNF548Q8NEK5 533 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 OR4F6Q8NGB9 312 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 TBC1D15Q8TC07 691 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 METTL6Q8TCB7 284 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 UBTD2Q8WUN7 234 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 ESAMQ96AP7 390 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 PLD4Q96BZ4 506 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 EID2BQ96D98 161 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 AURKBQ96GD4 344 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 EXOC2Q96KP1 924 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 B3GALT6Q96L58 329 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 PPP3R2Q96LZ3 170 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 PPM1MQ96MI6 270 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 RNF145Q96MT1 663 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 FAM193BQ96PV7 902 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 SEPT5Q99719 369 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 SPON2Q9BUD6 331 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 SOX17Q9H6I2 414 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 C12orf49Q9H741 205 aa5.1□□□□□ -1.59
ATPAF1-212ENST00000542495 POLR1BQ9H9Y6 1135 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms