RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 COPS7BQ9H9Q2 264 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-218ENST00000541615 LRRC4Q9HBW1 653 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 PCDH9Q9HC56 1237 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 PRMT8Q9NR22 394 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-218ENST00000541615 FBXO6Q9NRD1 293 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-218ENST00000541615 SPASTQ9UBP0 616 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 GIMAP2Q9UG22 337 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 WARS2Q9UGM6 360 aaKnown RBP5.12□□□□□ -1.59
SNHG1-218ENST00000541615 IL19Q9UHD0 177 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 SCP2D1Q9UJQ7 156 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 USP18Q9UMW8 372 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 USP22Q9UPT9 525 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 PCDHGB1Q9Y5G3 927 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 PCDHGA1Q9Y5H4 931 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 NPFFR2Q9Y5X5 522 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 FRMPD2Q68DX3 1309 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-218ENST00000541615 NID2Q14112 1375 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 HEG1Q9ULI3 1381 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 ZNF609O15014 1411 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 COL3A1P02461 1466 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-218ENST00000541615 ERCC6L2Q5T890 1561 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 PREX1Q8TCU6 1659 aa5.12□□□□□ -1.59
SNHG1-218ENST00000541615 LOC100506127A0A0U1RQW1 187 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 BCLAF3A2AJT9 711 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 FAM221AA4D161 298 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 SDR42E2A6NKP2 422 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TTLL8A6PVC2 850 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TCP10L2B9ZVM9 353 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 H7C4K7 107 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ARVCFO00192 962 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 POLRMTO00411 1230 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ZNF213O14771 459 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TP73O15350 636 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 PAPSS1O43252 624 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CYP7B1O75881 506 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 KRT33AO76009 404 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 AHSGP02765 367 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 RAF1P04049 648 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 SERPINF2P08697 491 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ACAA1P09110 424 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CNPP09543 421 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 DHRS4L1P0CG22 281 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ADORA3P0DMS8 318 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CBSLP0DN79 551 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 RALAP11233 206 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 IFI30P13284 250 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ITGA4P13612 1032 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 PKMP14618 531 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ATF2P15336 505 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CREB1P16220 341 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CD36P16671 472 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 GALP22466 123 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ATP5F1P24539 256 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 DNASE1P24855 282 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ITGB8P26012 769 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CBSP35520 551 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 PPM1AP35813 382 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 FEN1P39748 380 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 WNT5AP41221 380 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 MCAMP43121 646 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 MAGEA6P43360 314 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 GPR3P46089 330 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 PREPP48147 710 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CEBPGP53567 150 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 RAB5BP61020 215 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 RHDQ02161 417 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 HSF2Q03933 536 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CLCQ05315 142 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 SRSF11Q05519 484 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 FSTL1Q12841 308 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TRAF3Q13114 568 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 SLC13A2Q13183 592 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ORC2Q13416 577 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 PTK6Q13882 451 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 USP10Q14694 798 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 MAPK11Q15759 364 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ZNF404Q494X3 552 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TRIM61Q5EBN2 209 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TOR1AIP1Q5JTV8 583 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 STXBP5Q5T5C0 1151 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ANKRD22Q5VYY1 191 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ANKS6Q68DC2 871 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ARHGAP17Q68EM7 881 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 BICRALQ6AI39 1079 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 RAET1GQ6H3X3 334 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 C16orf46Q6P387 395 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CNNM4Q6P4Q7 775 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 RSBN1LQ6PCB5 846 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ZC3H14Q6PJT7 736 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 DEGS2Q6QHC5 323 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 LIPIQ6XZB0 460 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 FAM92BQ6ZTR7 304 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 NUP54Q7Z3B4 507 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 DCXRQ7Z4W1 244 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 HSD17B13Q7Z5P4 300 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 IQCHQ86VS3 1027 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 SLC13A5Q86YT5 568 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 RFX6Q8HWS3 928 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 SIAH1Q8IUQ4 282 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 GID4Q8IVV7 300 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms