RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 NSG1A0A0A6YYJ2 146 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 GTPBP10A4D1E9 387 aaKnown RBP9.11□□□□□ -0.95
YBX3-211ENST00000541351 NKX2-6A6NCS4 301 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 C2CD4BA6NLJ0 364 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 EEF2KO00418 725 aaKnown RBP9.11□□□□□ -0.95
YBX3-211ENST00000541351 ASNA1O43681 348 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 KLK8O60259 260 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 CRLF1O75462 422 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 CLDN7O95471 211 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 SERPINA7P05543 415 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 ICAM2P13598 275 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 POLR2CP19387 275 aaPredicted RBP9.11□□□□□ -0.95
YBX3-211ENST00000541351 NSG1P42857 185 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 LMAN1P49257 510 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 TFF3Q07654 80 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 SLC10A7Q0GE19 358 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 SLC9A5Q14940 896 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 PCBP2Q15366 365 aaKnown RBP eCLIP9.11□□□□□ -0.95
YBX3-211ENST00000541351 ZNF766Q5HY98 468 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 CATSPEREQ5SY80 951 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 ZNF658Q5TYW1 1059 aaPredicted RBP9.11□□□□□ -0.95
YBX3-211ENST00000541351 ERICH6BQ5W0A0 696 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 TRIM65Q6PJ69 517 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 CNSTQ6PJW8 725 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 ACAD11Q709F0 780 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 CHSY3Q70JA7 882 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 OVCH1Q7RTY7 1134 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 CDC20BQ86Y33 519 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 P3H2Q8IVL5 708 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 PYROXD2Q8N2H3 581 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 TRAM1L1Q8N609 369 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 TMEM178AQ8NBL3 297 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 ARMC2Q8NEN0 867 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 GPR150Q8NGU9 434 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 GPT2Q8TD30 523 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 SLC20A1Q8WUM9 679 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 GLYATL1Q969I3 302 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 SLC26A1Q9H2B4 701 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 SRMSQ9H3Y6 488 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 LIME1Q9H400 295 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 WDR37Q9Y2I8 494 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
YBX3-211ENST00000541351 SPTBP11277 2137 aa9.11□□□□□ -0.95
YBX3-211ENST00000541351 ANKRD12Q6UB98 2062 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 A0A1B0GVL5 298 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 A0A1B0GX78 115 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 BICDL2A1A5D9 508 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 C2orf74A8MZ97 194 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 NPIPA5E9PKD4 350 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 DDX3XO00571 662 aaKnown RBP eCLIP9.1□□□□□ -0.95
YBX3-211ENST00000541351 CES2O00748 559 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 FGFR1OPO95684 399 aaKnown RBP9.1□□□□□ -0.95
YBX3-211ENST00000541351 WDPCPO95876 746 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 PRR35P0CG20 571 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 KRT3P12035 628 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 ALAS2P22557 587 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 IL4RP24394 825 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 CXCR2P25025 360 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 EEF1DP29692 281 aaKnown RBP9.1□□□□□ -0.95
YBX3-211ENST00000541351 PRDX3P30048 256 aaKnown RBP9.1□□□□□ -0.95
YBX3-211ENST00000541351 KIR2DL3P43628 341 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 MMP13P45452 471 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 DCDC1P59894 354 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 CUL4AQ13619 759 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 GALNT3Q14435 633 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 MARC1Q5VT66 337 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 YOD1Q5VVQ6 348 aaPredicted RBP9.1□□□□□ -0.95
YBX3-211ENST00000541351 HIBCHQ6NVY1 386 aaPredicted RBP9.1□□□□□ -0.95
YBX3-211ENST00000541351 GBP6Q6ZN66 633 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 CAPN12Q6ZSI9 719 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 CEP128Q6ZU80 1094 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 NDUFAF7Q7L592 441 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 ZZZ3Q8IYH5 903 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 HORMAD2Q8N7B1 307 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 BRIX1Q8TDN6 353 aaKnown RBP9.1□□□□□ -0.95
YBX3-211ENST00000541351 CNPY3Q9BT09 278 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 PITPNM3Q9BZ71 974 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 POLR1EQ9GZS1 481 aaKnown RBP9.1□□□□□ -0.95
YBX3-211ENST00000541351 CHRNA10Q9GZZ6 450 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 TP63Q9H3D4 680 aaPredicted RBP9.1□□□□□ -0.95
YBX3-211ENST00000541351 ZNF160Q9HCG1 818 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 RIC8BQ9NVN3 520 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 DHCR7Q9UBM7 475 aaKnown RBP9.1□□□□□ -0.95
YBX3-211ENST00000541351 SLC24A2Q9UI40 661 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 ACSL5Q9ULC5 683 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 FZD10Q9ULW2 581 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 NPIPA1Q9UND3 350 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 GTF3C1Q12789 2109 aa9.1□□□□□ -0.95
YBX3-211ENST00000541351 RASGRF2O14827 1237 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 DDX3YO15523 660 aaKnown RBP9.09□□□□□ -0.95
YBX3-211ENST00000541351 FZD6O60353 706 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 GOSR1O95249 250 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 ATE1O95260 518 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 SLC35G4P0C7Q5 338 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 CD46P15529 392 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 ST6GAL1P15907 406 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 GPD1P21695 349 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 CDH6P55285 790 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 ITKQ08881 620 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 OLIG2Q13516 323 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms