RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 SOBPA7XYQ1 873 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 FUCA1P04066 466 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 AGXTP21549 392 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 CD6P30203 668 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 MAPK10P53779 464 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 GP2P55259 537 aaKnown RBP9.36□□□□□ -0.91
CNOT4-212ENST00000541284 ISL1P61371 349 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 DUSP4Q13115 394 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 PHKG1Q16816 387 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 RUNDC3AQ59EK9 446 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 SLC15A4Q8N697 577 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 ITFG1Q8TB96 612 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 METTL6Q8TCB7 284 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 HDAC2Q92769 488 aaKnown RBP9.36□□□□□ -0.91
CNOT4-212ENST00000541284 BORCS5Q969J3 196 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 MUL1Q969V5 352 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 SEPT5Q99719 369 aaPredicted RBP9.36□□□□□ -0.91
CNOT4-212ENST00000541284 BTBD2Q9BX70 525 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 PAIP1Q9H074 479 aaKnown RBP9.36□□□□□ -0.91
CNOT4-212ENST00000541284 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.36□□□□□ -0.91
CNOT4-212ENST00000541284 CLMPQ9H6B4 373 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 ASIC5Q9NY37 505 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 PKD2L2Q9NZM6 624 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 GIPC1O14908 333 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 FFAR2O15552 330 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 COCHO43405 550 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 NBNO60934 754 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 STC2O76061 302 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 B3GALT4O96024 378 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 PIGFQ07326 219 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 CD47Q08722 323 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 MOGQ16653 247 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 RBM48Q5RL73 367 aaKnown RBP9.36□□□□□ -0.91
CNOT4-212ENST00000541284 TRIM46Q7Z4K8 759 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 THAP5Q7Z6K1 395 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 RBM12BQ8IXT5 1001 aaKnown RBP9.36□□□□□ -0.91
CNOT4-212ENST00000541284 KRTCAP2Q8N6L1 136 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 TERB1Q8NA31 727 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 SLC13A3Q8WWT9 602 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 ABTB1Q969K4 478 aaPredicted RBP9.36□□□□□ -0.91
CNOT4-212ENST00000541284 AURKBQ96GD4 344 aaPredicted RBP9.36□□□□□ -0.91
CNOT4-212ENST00000541284 SPON2Q9BUD6 331 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 CCDC68Q9H2F9 335 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 SUN2Q9UH99 717 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 COMMD10Q9Y6G5 202 aa9.36□□□□□ -0.91
CNOT4-212ENST00000541284 E9PQ18 207 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 BOLA2-SMG1P6H3BVE0 249 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 IFRD1O00458 451 aaPredicted RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 ALBP02768 609 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 HTR1BP28222 390 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 PLIN5Q00G26 463 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 TUBA3CQ13748 450 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 SPCS2Q15005 226 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 NR6A1Q15406 480 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 MEP1AQ16819 746 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 ZRANB3Q5FWF4 1079 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 HABP4Q5JVS0 413 aaKnown RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 C6orf141Q5SZD1 244 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 LINGO4Q6UY18 593 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 GIPC3Q8TF64 312 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 UBTD2Q8WUN7 234 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 SNRNP27Q8WVK2 155 aaKnown RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 ALG14Q96F25 216 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 RDH12Q96NR8 316 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 CPPED1Q9BRF8 314 aaPredicted RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 VN1R3Q9BXE9 311 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 IPPKQ9H8X2 491 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 OARD1Q9Y530 152 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 CDH23Q9H251 3354 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 TRBV5-4A0A0C4DH59 114 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 A0A1W2PQ45 241 aaPredicted RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 A0A1W2PQY0 241 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 NOBOXO60393 691 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 DEAF1O75398 565 aaPredicted RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 HMGA1P17096 107 aaKnown RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 GDF5P43026 501 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 HSPA7P48741 367 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 SLC11A1P49279 550 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 ARPP19P56211 112 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 CYP4F3Q08477 520 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 KCNAB2Q13303 367 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 CTF1Q16619 201 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 USP39Q53GS9 565 aaKnown RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 SPANXN4Q5MJ08 99 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 CHST9Q7L1S5 443 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 BTLAQ7Z6A9 289 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 GPR149Q86SP6 731 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 STK32CQ86UX6 486 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 ZBTB46Q86UZ6 589 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 GALNT13Q8IUC8 556 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 DENND1CQ8IV53 801 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 EFHBQ8N7U6 833 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 OR10A6Q8NH74 314 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 CHPT1Q8WUD6 406 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 PIH1D2Q8WWB5 315 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 USP7Q93009 1102 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 BARD1Q99728 777 aaKnown RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 KAT8Q9H7Z6 458 aaKnown RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 DNAJB9Q9UBS3 223 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms