RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 MUC13Q9H3R2 512 aa3.2□□□□□ -1.9
MDM2-227ENST00000540709 A4GALTQ9NPC4 353 aa3.2□□□□□ -1.9
MDM2-227ENST00000540709 EIF2B3Q9NR50 452 aaKnown RBP3.2□□□□□ -1.9
MDM2-227ENST00000540709 TMEM181Q9P2C4 612 aa3.2□□□□□ -1.9
MDM2-227ENST00000540709 E9PI62 339 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 SLCO1B7G3V0H7 640 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 ATP6V0E1O15342 81 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 DCXO43602 365 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 CD4P01730 458 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 PON1P27169 355 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 MAN1A1P33908 653 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 CSRP3P50461 194 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 SNX16P57768 344 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 TMF1P82094 1093 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 FAM98BQ52LJ0 330 aaKnown RBP3.19□□□□□ -1.9
MDM2-227ENST00000540709 TRIM65Q6PJ69 517 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 DOK6Q6PKX4 331 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 METTL7BQ6UX53 244 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 P2RY8Q86VZ1 359 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 CFAP206Q8IYR0 622 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 OR2T11Q8NH01 316 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 OR4C3Q8NH37 302 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 OLIG1Q8TAK6 271 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 USP6NLQ92738 828 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 CLEC7AQ9BXN2 247 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 LAT2Q9GZY6 243 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 SEPT11Q9NVA2 429 aaKnown RBP3.19□□□□□ -1.9
MDM2-227ENST00000540709 FLRT3Q9NZU0 649 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 AMACRQ9UHK6 382 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 RUSC2Q8N2Y8 1516 aa3.19□□□□□ -1.9
MDM2-227ENST00000540709 A8MZ25 164 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.18□□□□□ -1.9
MDM2-227ENST00000540709 B4E171 279 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 J3KRW8 73 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 TO15178 435 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 PRKRAO75569 313 aaKnown RBP3.18□□□□□ -1.9
MDM2-227ENST00000540709 ZWINTO95229 277 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 MBD4O95243 580 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 CLDN1O95832 211 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 GABRB1P18505 474 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 TSPAN7P41732 249 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 MAGEA11P43364 429 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 MPP1Q00013 466 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 GRAPQ13588 217 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 MELKQ14680 651 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 TEAD2Q15562 447 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 MDH1BQ5I0G3 518 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 SNX30Q5VWJ9 437 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 BSPRYQ5W0U4 402 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 INTS8Q75QN2 995 aaKnown RBP3.18□□□□□ -1.9
MDM2-227ENST00000540709 CDK20Q8IZL9 346 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 CPSF7Q8N684 471 aaKnown RBP3.18□□□□□ -1.9
MDM2-227ENST00000540709 RNF128Q8TEB7 428 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 HPSE2Q8WWQ2 592 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 ARHGAP45Q92619 1136 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 ERLEC1Q96DZ1 483 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 SGK494Q96LW2 274 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 DACH2Q96NX9 599 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 SLC22A12Q96S37 553 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 RBM4BQ9BQ04 359 aaKnown RBP3.18□□□□□ -1.9
MDM2-227ENST00000540709 FNDC11Q9BVV2 318 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 DGCR6LQ9BY27 220 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 FGFBP2Q9BYJ0 223 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 S1PR5Q9H228 398 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 SMARCAD1Q9H4L7 1026 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 RHCGQ9UBD6 479 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 LYVE1Q9Y5Y7 322 aa3.18□□□□□ -1.9
MDM2-227ENST00000540709 LOC101059948A0A1B0GTJ6 334 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 HYKKA2RU49 373 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 LRRC72A6NJI9 287 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 ZNF195O14628 629 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 SSX4O60224 188 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 OR2C1O95371 312 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 TRIM49P0CI25 452 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 TRIM49CP0CI26 452 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 LAMP2P13473 410 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 MMP9P14780 707 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 ACADSP16219 412 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 EFNA1P20827 205 aaPredicted RBP3.17□□□□□ -1.9
MDM2-227ENST00000540709 MAPK4P31152 587 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 GABRA5P31644 462 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 KRT2P35908 639 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 NOVP48745 357 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 SUOXP51687 545 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 CX3CL1P78423 397 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 UGP2Q16851 508 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 CCDC30Q5VVM6 783 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 PTAR1Q7Z6K3 402 aaPredicted RBP3.17□□□□□ -1.9
MDM2-227ENST00000540709 PIGZQ86VD9 579 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 C1orf131Q8NDD1 294 aaKnown RBP3.17□□□□□ -1.9
MDM2-227ENST00000540709 SAT2Q96F10 170 aaPredicted RBP3.17□□□□□ -1.9
MDM2-227ENST00000540709 ZNF300Q96RE9 604 aaPredicted RBP3.17□□□□□ -1.9
MDM2-227ENST00000540709 HRH4Q9H3N8 390 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 OSER1Q9NX31 292 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 TAB2Q9NYJ8 693 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 ASIC3Q9UHC3 531 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 ZHX1Q9UKY1 873 aaPredicted RBP3.17□□□□□ -1.9
MDM2-227ENST00000540709 MOB4Q9Y3A3 225 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 ZHX2Q9Y6X8 837 aa3.17□□□□□ -1.9
MDM2-227ENST00000540709 CACNA1FO60840 1977 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms