RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 FBXL8Q96CD0 374 aa16.8■□□□□ 0.28
LTBR-207ENST00000539925 CHFRQ96EP1 664 aa16.8■□□□□ 0.28
LTBR-207ENST00000539925 C3orf30Q96M34 536 aa16.8■□□□□ 0.28
LTBR-207ENST00000539925 TMEM79Q9BSE2 394 aa16.8■□□□□ 0.28
LTBR-207ENST00000539925 SDR39U1Q9NRG7 319 aaPredicted RBP16.8■□□□□ 0.28
LTBR-207ENST00000539925 ZNF225Q9UK10 706 aa16.8■□□□□ 0.28
LTBR-207ENST00000539925 CHD9Q3L8U1 2897 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 SLC5A10A0PJK1 596 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 A8MUI8 341 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 GPR89AB7ZAQ6 455 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 SLC28A1O00337 649 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 AIM2O14862 343 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 MMP20O60882 483 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 MTX2O75431 263 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 PSIP1O75475 530 aaKnown RBP16.79■□□□□ 0.28
LTBR-207ENST00000539925 LINC00032P0C843 101 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 GPR89BP0CG08 455 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 GALK1P51570 392 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 CNTN1Q12860 1018 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 SFSWAPQ12872 951 aaKnown RBP16.79■□□□□ 0.28
LTBR-207ENST00000539925 TRAF3Q13114 568 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 MMEL1Q495T6 779 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 GGTA1PQ4G0N0 100 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 KHDC1Q4VXA5 237 aaKnown RBP16.79■□□□□ 0.28
LTBR-207ENST00000539925 C1orf146Q5VVC0 180 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 LETMD1Q6P1Q0 360 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 TMEM220Q6QAJ8 160 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 SLC22A15Q8IZD6 547 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 DSELQ8IZU8 1212 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 OR4F6Q8NGB9 312 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 OR52B6Q8NGF0 335 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 OR2T3Q8NH03 318 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 FBXO27Q8NI29 283 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 PPP3R2Q96LZ3 170 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 KCNA7Q96RP8 456 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 C8orf33Q9H7E9 229 aaPredicted RBP16.79■□□□□ 0.28
LTBR-207ENST00000539925 SLC7A8Q9UHI5 535 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 TSR3Q9UJK0 312 aaKnown RBP16.79■□□□□ 0.28
LTBR-207ENST00000539925 CNOT6Q9ULM6 557 aaKnown RBP16.79■□□□□ 0.28
LTBR-207ENST00000539925 SCML1Q9UN30 329 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.79■□□□□ 0.28
LTBR-207ENST00000539925 MYO9BQ13459 2157 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 DENND4AQ7Z401 1863 aa16.79■□□□□ 0.28
LTBR-207ENST00000539925 ATP6AP2A0A1C7CYW4 349 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 OR2AG2A6NM03 316 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 MEI4A8MW99 385 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 ATP6AP2O75787 350 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 SOD1P00441 154 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 KRT6AP02538 564 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 KRT6BP04259 564 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 CAPN1P07384 714 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 KIR2DL1P43626 348 aaPredicted RBP16.78■□□□□ 0.28
LTBR-207ENST00000539925 KRT6CP48668 564 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 ACTR3P61158 418 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 BNC2Q6ZN30 1099 aaPredicted RBP16.78■□□□□ 0.28
LTBR-207ENST00000539925 EP400NLQ6ZTU2 488 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 RALGPS2Q86X27 583 aaPredicted RBP16.78■□□□□ 0.28
LTBR-207ENST00000539925 SFTPA1Q8IWL2 248 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 FBXW8Q8N3Y1 598 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 ESAMQ96AP7 390 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 ROPN1LQ96C74 230 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 RCN3Q96D15 328 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 HIC2Q96JB3 615 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 CCDC138Q96M89 665 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 HCN2Q9UL51 889 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 BTRCQ9Y297 605 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 NDUFAF1Q9Y375 327 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 ASB1Q9Y576 335 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 TIMM22Q9Y584 194 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 DNMT3AQ9Y6K1 912 aaPredicted RBP16.78■□□□□ 0.28
LTBR-207ENST00000539925 RGS14O43566 566 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 UGDHO60701 494 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 PEX11AO75192 247 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 FKBP6O75344 327 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 GPX3P22352 226 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 PRDX3P30048 256 aaKnown RBP16.78■□□□□ 0.28
LTBR-207ENST00000539925 NTSR1P30989 418 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 SLC6A12P48065 614 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 METAP1P53582 386 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 MTTPP55157 894 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 KPNB1Q14974 876 aaKnown RBP16.78■□□□□ 0.28
LTBR-207ENST00000539925 PDCD4Q53EL6 469 aaKnown RBP16.78■□□□□ 0.28
LTBR-207ENST00000539925 FBXO48Q5FWF7 155 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 NAIF1Q69YI7 327 aaPredicted RBP16.78■□□□□ 0.28
LTBR-207ENST00000539925 AAGABQ6PD74 315 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 GALNT13Q8IUC8 556 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 KLHDC8AQ8IYD2 350 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 NAT14Q8WUY8 206 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 MARK4Q96L34 752 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 ACOX2Q99424 681 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 GABRG3Q99928 467 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 BRINP2Q9C0B6 783 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 DPEP2Q9H4A9 486 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 AIG1Q9NVV5 245 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 ZIM2Q9NZV7 527 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 TCF20Q9UGU0 1960 aaKnown RBP16.78■□□□□ 0.28
LTBR-207ENST00000539925 BPTFQ12830 3046 aa16.78■□□□□ 0.28
LTBR-207ENST00000539925 INPP4BO15327 924 aa16.77■□□□□ 0.28
LTBR-207ENST00000539925 NRP2O60462 931 aa16.77■□□□□ 0.28
LTBR-207ENST00000539925 CLDN9O95484 217 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms