RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 UBXN2BQ14CS0 331 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 GPRC6AQ5T6X5 926 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 ERAP2Q6P179 960 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 BORAQ6PGQ7 559 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 TMEM92Q6UXU6 159 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 TRIM67Q6ZTA4 783 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 ZNF765Q7L2R6 523 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 SYNPOQ8N3V7 929 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 TRAM1L1Q8N609 369 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 ZNF781Q8N8C0 355 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 SIDT2Q8NBJ9 832 aaKnown RBP8.69□□□□□ -1.02
DDB1-213ENST00000539332 DDHD1Q8NEL9 900 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 SVIPQ8NHG7 77 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 FUBP1Q96AE4 644 aaKnown RBP8.69□□□□□ -1.02
DDB1-213ENST00000539332 CNDP1Q96KN2 507 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 NELL2Q99435 816 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 TRMOQ9BU70 441 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 ZSCAN5AQ9BUG6 496 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 C1QTNF3Q9BXJ4 246 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 FOXQ1Q9C009 403 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 NMUR2Q9GZQ4 415 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 ILKAPQ9H0C8 392 aaPredicted RBP8.69□□□□□ -1.02
DDB1-213ENST00000539332 SLC6A17Q9H1V8 727 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 GSTO2Q9H4Y5 243 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 LMAN1LQ9HAT1 526 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 PNPOQ9NVS9 261 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 ITM2BQ9Y287 266 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 KNL1Q8NG31 2342 aa8.69□□□□□ -1.02
DDB1-213ENST00000539332 FAM170BA6NMN3 283 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 E5RI56 91 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 STX16-NPEPL1H3BU86 382 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 MATN2O00339 956 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 IFRD1O00458 451 aaPredicted RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 STX16O14662 325 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 HSPA4LO95757 839 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 VCLP18206 1134 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 MPSTP25325 297 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 HSPA13P48723 471 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 AQP5P55064 265 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 RAB15P59190 212 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 NAA20P61599 178 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 HERVK_113P63132 956 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 ELP6Q0PNE2 266 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 MMEL1Q495T6 779 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.68□□□□□ -1.02
DDB1-213ENST00000539332 TMEM52BQ4KMG9 183 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 ARL13AQ5H913 290 aaPredicted RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 ZNF678Q5SXM1 525 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 PIP5KL1Q5T9C9 394 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 AGBL4Q5VU57 503 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 ICA1LQ8NDH6 482 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 STAG3L4Q8TBR4 150 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 EEF1AKMT1Q8WVE0 214 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 RAB7BQ96AH8 199 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 SGF29Q96ES7 293 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 LINGO1Q96FE5 620 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 DTD2Q96FN9 168 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 MRGPRX1Q96LB2 322 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 NECAB3Q96P71 396 aaPredicted RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 COPS8Q99627 209 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 THTPAQ9BU02 230 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 ERVK-6Q9BXR3 956 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 MRPS26Q9BYN8 205 aaKnown RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 FAM83DQ9H4H8 585 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 TBC1D17Q9HA65 648 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 TBCCD1Q9NVR7 557 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 MARCOQ9UEW3 520 aaPredicted RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 SERGEFQ9UGK8 458 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 SLC7A8Q9UHI5 535 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 BCAP29Q9UHQ4 241 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 DMTF1Q9Y222 760 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 SYCE1LA8MT33 242 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 IQCF5A8MTL0 148 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 FADS2P1A8MWK0 482 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 CHURC1-FNTBB4DL54 471 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 SLCO1B7G3V0H7 640 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 UBXN8O00124 270 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 CDC7O00311 574 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 DENRO43583 198 aaKnown RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 SGTAO43765 313 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 RNASEH2AO75792 299 aaKnown RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 AP2A2O94973 939 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 ENO1P06733 434 aaKnown RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 RPS17P08708 135 aaKnown RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 ELFN1P0C7U0 828 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 CBSLP0DN79 551 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 CHRM3P20309 590 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 CBSP35520 551 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 GNALP38405 381 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 ETV3P41162 512 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 CCR10P46092 362 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 RPL14P50914 215 aaKnown RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 HPCAP84074 193 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 GAS6Q14393 721 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 PDK3Q15120 406 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 TSNQ15631 228 aaKnown RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 UNC50Q53HI1 259 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 PTRHD1Q6GMV3 140 aaKnown RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 EPGNQ6UW88 154 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 SBSNQ6UWP8 590 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms