RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PPP1R21Q6ZMI0 780 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 OR8K5Q8NH50 307 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 C9orf43Q8TAL5 461 aaPredicted RBP21.59■■□□□ 1.05
SCARB1-206ENST00000539320 UBE2Q2Q8WVN8 375 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.59■■□□□ 1.056e-7■■■■□ 24.2
SCARB1-206ENST00000539320 HGH1Q9BTY7 390 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 MVB12BQ9H7P6 319 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 ETNK1Q9HBU6 452 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 PCDHGA6Q9Y5G7 932 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 MYO18BQ8IUG5 2567 aa21.59■■□□□ 1.05
SCARB1-206ENST00000539320 HEATR9A2RTY3 570 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 GSAPA4D1B5 854 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 OR51F1A6NGY5 319 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 C21orf140B9A014 251 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 SUV39H1O43463 412 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 CPNE3O75131 537 aaKnown RBP21.58■■□□□ 1.05
SCARB1-206ENST00000539320 SUN1O94901 812 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 PDHA2P29803 388 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 LMAN1P49257 510 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 GPR19Q15760 415 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 PACS1Q6VY07 963 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 OR52E1Q8NGJ3 308 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 C1orf54Q8WWF1 131 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 ZNF501Q96CX3 271 aaPredicted RBP21.58■■□□□ 1.05
SCARB1-206ENST00000539320 C1GALT1Q9NS00 363 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 ZNF148Q9UQR1 794 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 POLHQ9Y253 713 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 PRSS21Q9Y6M0 314 aa21.58■■□□□ 1.05
SCARB1-206ENST00000539320 SPTBP11277 2137 aa21.58■■□□□ 1.04
SCARB1-206ENST00000539320 CCDC162PA2VCL2 907 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 E7EVH7 732 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 LIN7AO14910 233 aaPredicted RBP21.57■■□□□ 1.04
SCARB1-206ENST00000539320 WISP1O95388 367 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 NTRK1P04629 796 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 SEMA5AQ13591 1074 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 BOP1Q14137 746 aaKnown RBP21.57■■□□□ 1.04
SCARB1-206ENST00000539320 ERV3-1Q14264 604 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 AFTPHQ6ULP2 937 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 TMEM126BQ8IUX1 230 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 OR13J1Q8NGT2 312 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 TFGQ92734 400 aaPredicted RBP21.57■■□□□ 1.04
SCARB1-206ENST00000539320 TLR10Q9BXR5 811 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 TFB2MQ9H5Q4 396 aaKnown RBP21.57■■□□□ 1.04
SCARB1-206ENST00000539320 FANCEQ9HB96 536 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 LATS2Q9NRM7 1088 aa21.57■■□□□ 1.04
SCARB1-206ENST00000539320 SLC9B1P1A6NJY1 282 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 BTN3A3O00478 584 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 BTN3A1O00481 513 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 ARHGAP6O43182 974 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 CREG1O75629 220 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 SCRG1O75711 98 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 FTH1P02794 183 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 SNX1Q13596 522 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 LAMB3Q13751 1172 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 RPS6KA1Q15418 735 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 TSTD2Q5T7W7 516 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 PTRH1Q86Y79 214 aaKnown RBP21.56■■□□□ 1.04
SCARB1-206ENST00000539320 CCDC89Q8N998 374 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 PHC3Q8NDX5 983 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 ELMO1Q92556 727 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 RANBP9Q96S59 729 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 CLMPQ9H6B4 373 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 RAB6BQ9NRW1 208 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 KCND1Q9NSA2 647 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 RIMKLBQ9ULI2 386 aa21.56■■□□□ 1.04
SCARB1-206ENST00000539320 NBASA2RRP1 2371 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 CDC14CA4D256 554 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 GRIA1P42261 906 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 SYTL3Q4VX76 610 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 PRUNE1Q86TP1 453 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 AMIGO1Q86WK6 493 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 PITPNM3Q9BZ71 974 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 TWSG1Q9GZX9 223 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 ACTL8Q9H568 366 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 CASS4Q9NQ75 786 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 PAK5Q9P286 719 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 SLC2A6Q9UGQ3 507 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 KCNMB2Q9Y691 235 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 TENM4Q6N022 2769 aa21.55■■□□□ 1.04
SCARB1-206ENST00000539320 SEC16AO15027 2179 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 PIPSLA2A3N6 862 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 RECKO95980 971 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 GOT2P00505 430 aaKnown RBP21.54■■□□□ 1.04
SCARB1-206ENST00000539320 FURINP09958 794 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 OR56A5P0C7T3 313 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 ETS1P14921 441 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 ST6GAL1P15907 406 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 PRDX3P30048 256 aaKnown RBP21.54■■□□□ 1.04
SCARB1-206ENST00000539320 KCNC4Q03721 635 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 PRKG2Q13237 762 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 MEI1Q5TIA1 1274 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 LYPLAL1Q5VWZ2 237 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 HDAC10Q969S8 669 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 RUFY1Q96T51 708 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 TTC1Q99614 292 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 NRTNQ99748 197 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 XKR8Q9H6D3 395 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 SYTL2Q9HCH5 934 aa21.54■■□□□ 1.04
SCARB1-206ENST00000539320 ZNF71Q9NQZ8 489 aaPredicted RBP21.54■■□□□ 1.04
SCARB1-206ENST00000539320 ASH1LQ9NR48 2969 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms