RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 COG4Q9H9E3 785 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 FANCEQ9HB96 536 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 ARNT2Q9HBZ2 717 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 LRRC4CQ9HCJ2 640 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 C1GALT1Q9NS00 363 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 FEZ2Q9UHY8 353 aaPredicted RBP12.16□□□□□ -0.46
VAMP1-206ENST00000538970 FARSAQ9Y285 508 aaKnown RBP12.16□□□□□ -0.46
VAMP1-206ENST00000538970 TRBV5-4A0A0C4DH59 114 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 GSAPA4D1B5 854 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 ARGFXA6NJG6 315 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 MEN1O00255 615 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 BTN3A3O00478 584 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 BTN3A1O00481 513 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 DDX3YO15523 660 aaKnown RBP12.15□□□□□ -0.46
VAMP1-206ENST00000538970 KLK3P07288 261 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-206ENST00000538970 MSL3P1P0C860 447 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 ACRV1P26436 265 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 RORAP35398 523 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 RWDD2BP57060 319 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 GSDMDP57764 484 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 SPARCL1Q14515 664 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 GPR33Q49SQ1 333 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 ZNF789Q5FWF6 425 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 PLEKHS1Q5SXH7 462 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 LCN10Q6JVE6 187 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 AADACL2Q6P093 401 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 DSELQ8IZU8 1212 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 ENDOVQ8N8Q3 282 aaKnown RBP12.15□□□□□ -0.46
VAMP1-206ENST00000538970 OR1L3Q8NH93 324 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 ADAMTS17Q8TE56 1095 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 LCN9Q8WX39 176 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 DNAJC1Q96KC8 554 aaKnown RBP12.15□□□□□ -0.46
VAMP1-206ENST00000538970 FERD3LQ96RJ6 166 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 NRTNQ99748 197 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 TRIM5Q9C035 493 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 SRMSQ9H3Y6 488 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 MLXIPLQ9NP71 852 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 PCMTD2Q9NV79 361 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 ZDHHC3Q9NYG2 299 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 PLEKHB1Q9UF11 243 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-206ENST00000538970 SNX7Q9UNH6 387 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 PCDHGA9Q9Y5G4 932 aaKnown RBP12.15□□□□□ -0.46
VAMP1-206ENST00000538970 NBASA2RRP1 2371 aa12.15□□□□□ -0.46
VAMP1-206ENST00000538970 SOWAHDA6NJG2 315 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 BTNL10A8MVZ5 291 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 TMEM150CB9EJG8 249 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 H7C0S8 307 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 ZNF189O75820 626 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-206ENST00000538970 TJP3O95049 919 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 RAB40ALP0C0E4 278 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 PRSS56P0CW18 603 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 ST6GAL1P15907 406 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 PDHA2P29803 388 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 PRDX3P30048 256 aaKnown RBP12.14□□□□□ -0.47
VAMP1-206ENST00000538970 PTGIRP43119 386 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 PREPP48147 710 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 CD151P48509 253 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 CDKN1CP49918 316 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-206ENST00000538970 PGDP52209 483 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 PAPD7Q5XG87 772 aaKnown RBP12.14□□□□□ -0.47
VAMP1-206ENST00000538970 KCTD11Q693B1 232 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 FAM198BQ6UWH4 519 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 SERPINA9Q86WD7 417 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 LRRC57Q8N9N7 239 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 OR52E1Q8NGJ3 308 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 LRRC45Q96CN5 670 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 CLIP3Q96DZ5 547 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 SLC25A23Q9BV35 468 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 ING2Q9H160 280 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 TFB2MQ9H5Q4 396 aaKnown RBP12.14□□□□□ -0.47
VAMP1-206ENST00000538970 VPS37BQ9H9H4 285 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 SYTL2Q9HCH5 934 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 ACSS2Q9NR19 701 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 REXO2Q9Y3B8 237 aaKnown RBP12.14□□□□□ -0.47
VAMP1-206ENST00000538970 EPN1Q9Y6I3 576 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-206ENST00000538970 DUSP10Q9Y6W6 482 aa12.14□□□□□ -0.47
VAMP1-206ENST00000538970 IFRD1O00458 451 aaPredicted RBP12.13□□□□□ -0.47
VAMP1-206ENST00000538970 CEACAM4O75871 244 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 CAPN1P07384 714 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 CYP2A7P20853 494 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 LMAN1P49257 510 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 RPA4Q13156 261 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 BOP1Q14137 746 aaKnown RBP12.13□□□□□ -0.47
VAMP1-206ENST00000538970 ZRANB3Q5FWF4 1079 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 FAM69BQ5VUD6 431 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 ARHGEF18Q6ZSZ5 1173 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 AMIGO1Q86WK6 493 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 PIANPQ8IYJ0 282 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 SYTL1Q8IYJ3 562 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 CLDN19Q8N6F1 224 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 PHC3Q8NDX5 983 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 TRAPPC9Q96Q05 1148 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 PANX2Q96RD6 677 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 HGH1Q9BTY7 390 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 NLNQ9BYT8 704 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 LACRTQ9GZZ8 138 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 MVB12BQ9H7P6 319 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 LRRC40Q9H9A6 602 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 ACTR5Q9H9F9 607 aaPredicted RBP12.13□□□□□ -0.47
VAMP1-206ENST00000538970 NLE1Q9NVX2 485 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms