RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ZNF232Q9UNY5 417 aa14.3□□□□□ -0.12
CDCA3-207ENST00000538862 PRMT5O14744 637 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-207ENST00000538862 KLKB1P03952 638 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 CTSAP10619 480 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 CDH1P12830 882 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 MSH3P20585 1137 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 TUFMP49411 452 aaKnown RBP14.29□□□□□ -0.12
CDCA3-207ENST00000538862 ARF5P84085 180 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 CRY1Q16526 586 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 IL27RAQ6UWB1 636 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 CERS6Q6ZMG9 384 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 ZNF783Q6ZMS7 281 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 FRA10AC1Q70Z53 315 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 RIMKLAQ8IXN7 391 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 TTPALQ9BTX7 342 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 CHID1Q9BWS9 393 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 APOL5Q9BWW9 433 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 LSM1O15116 133 aaKnown RBP14.29□□□□□ -0.12
CDCA3-207ENST00000538862 COCHO43405 550 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 STC2O76061 302 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 CAPN1P07384 714 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 CORO1AP31146 461 aaKnown RBP14.29□□□□□ -0.12
CDCA3-207ENST00000538862 OR4D2P58180 307 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 ADARB1P78563 741 aaKnown RBP14.29□□□□□ -0.12
CDCA3-207ENST00000538862 PWP1Q13610 501 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 GTF2H2Q13888 395 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 INO80DQ53TQ3 878 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-207ENST00000538862 ADGRF1Q5T601 910 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 RNF219Q5W0B1 726 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-207ENST00000538862 CXorf57Q6NSI4 855 aaKnown RBP14.29□□□□□ -0.12
CDCA3-207ENST00000538862 GTF2H2CQ6P1K8 395 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 SLC2A7Q6PXP3 512 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 CYP20A1Q6UW02 462 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 GOLGA7Q7Z5G4 137 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 GALNT13Q8IUC8 556 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 CARNMT1Q8N4J0 409 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 MAGEE2Q8TD90 523 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-207ENST00000538862 ISOC1Q96CN7 298 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 CGREF1Q99674 301 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 SARS2Q9NP81 518 aaKnown RBP14.29□□□□□ -0.12
CDCA3-207ENST00000538862 IL17CQ9P0M4 197 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 BLOC1S6Q9UL45 172 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 PKP3Q9Y446 797 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 ZNF711Q9Y462 761 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 SLC30A1Q9Y6M5 507 aa14.29□□□□□ -0.12
CDCA3-207ENST00000538862 ANKRD28O15084 1053 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 SEC24DO94855 1032 aaPredicted RBP14.28□□□□□ -0.12
CDCA3-207ENST00000538862 PRSS23O95084 383 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 CD160O95971 181 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 OTCP00480 354 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 SOD2P04179 222 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 S100BP04271 92 aaPredicted RBP14.28□□□□□ -0.12
CDCA3-207ENST00000538862 G6PDP11413 515 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 RPS3P23396 243 aaKnown RBP eCLIP14.28□□□□□ -0.123e-9■■■■■ 36.7
CDCA3-207ENST00000538862 JAK1P23458 1154 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 HMGCLP35914 325 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 SGSHP51688 502 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 SMU1Q2TAY7 513 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 SBSNQ6UWP8 590 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 GPR180Q86V85 440 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 CLVS1Q8IUQ0 354 aaPredicted RBP14.28□□□□□ -0.12
CDCA3-207ENST00000538862 TERB1Q8NA31 727 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 PDPRQ8NCN5 879 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 OR8J3Q8NGG0 315 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 ZNF420Q8TAQ5 688 aaPredicted RBP14.28□□□□□ -0.12
CDCA3-207ENST00000538862 PNPT1Q8TCS8 783 aaKnown RBP14.28□□□□□ -0.12
CDCA3-207ENST00000538862 LZICQ8WZA0 190 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 FBXL20Q96IG2 436 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 RNF145Q96MT1 663 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 CDK15Q96Q40 435 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 SEPHS2Q99611 448 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 NPLQ9BXD5 320 aaPredicted RBP14.28□□□□□ -0.12
CDCA3-207ENST00000538862 ACTL8Q9H568 366 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 MAGEE1Q9HCI5 957 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 PKD2L2Q9NZM6 624 aa14.28□□□□□ -0.12
CDCA3-207ENST00000538862 CARNS1A5YM72 827 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 OR7A17O14581 309 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 RAD51BO15315 384 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 FZD6O60353 706 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 DEAF1O75398 565 aaPredicted RBP14.27□□□□□ -0.12
CDCA3-207ENST00000538862 VARSP26640 1264 aaKnown RBP14.27□□□□□ -0.12
CDCA3-207ENST00000538862 RPL10P27635 214 aaKnown RBP14.27□□□□□ -0.12
CDCA3-207ENST00000538862 HTR6P50406 440 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 EMP3P54852 163 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 AP5B1Q2VPB7 878 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 RNF165Q6ZSG1 346 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 FKBP9P1Q75LS8 142 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 OR4F6Q8NGB9 312 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 VPS50Q96JG6 964 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 MSLNLQ96KJ4 702 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 RPL10LQ96L21 214 aaKnown RBP14.27□□□□□ -0.12
CDCA3-207ENST00000538862 PPP3R2Q96LZ3 170 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 CDCA3Q99618 268 aaPredicted RBP14.27□□□□□ -0.12
CDCA3-207ENST00000538862 C19orf43Q9BQ61 176 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 HERC2P3Q9BVR0 1158 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 LHX3Q9UBR4 397 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 CD207Q9UJ71 328 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 CDH7Q9ULB5 785 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 HCFC2Q9Y5Z7 792 aa14.27□□□□□ -0.12
CDCA3-207ENST00000538862 FFAR2O15552 330 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms