RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CPA3P15088 417 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 KCNA4P22459 653 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 TGM1P22735 817 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 ITPKAP23677 461 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 PDHA2P29803 388 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 MDH1P40925 334 aaKnown RBP13.84□□□□□ -0.19
CD4-208ENST00000538827 ETV4P43268 484 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 BDKRB1P46663 353 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 GNGT1P63211 74 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 ABRQ12979 859 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 PCLAFQ15004 111 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 ZNF542PQ5EBM4 170 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 ZYG11AQ6WRX3 759 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 PRR23BQ6ZRT6 265 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 UBE2R2Q712K3 238 aaPredicted RBP13.84□□□□□ -0.19
CD4-208ENST00000538827 PARGQ86W56 976 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 PHACTR4Q8IZ21 702 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 SLC22A15Q8IZD6 547 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 MFSD2AQ8NA29 543 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 ZBTB44Q8NCP5 570 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 RDH11Q8TC12 318 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 KIAA1191Q96A73 305 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 FOPNLQ96NB1 174 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 ZSCAN32Q9NX65 697 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 UTP6Q9NYH9 597 aaKnown RBP13.84□□□□□ -0.19
CD4-208ENST00000538827 ADAMTS6Q9UKP5 1117 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 PSMD13Q9UNM6 376 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 CDYLQ9Y232 598 aa13.84□□□□□ -0.19
CD4-208ENST00000538827 DNMT3AQ9Y6K1 912 aaPredicted RBP13.84□□□□□ -0.19
CD4-208ENST00000538827 TDRD6O60522 2096 aaKnown RBP13.84□□□□□ -0.19
CD4-208ENST00000538827 NEMP2A6NFY4 417 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 NCF1BA6NI72 391 aaPredicted RBP13.83□□□□□ -0.2
CD4-208ENST00000538827 SYCE1LA8MT33 242 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 PDZK1P1A8MUH7 402 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 NCF1CA8MVU1 366 aaPredicted RBP13.83□□□□□ -0.2
CD4-208ENST00000538827 TNFRSF10CO14798 259 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 BCAT2O15382 392 aaPredicted RBP13.83□□□□□ -0.2
CD4-208ENST00000538827 HRO43593 1189 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 SLCO2B1O94956 709 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 BPGMP07738 259 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 GFAPP14136 432 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 NCF1P14598 390 aaPredicted RBP13.83□□□□□ -0.2
CD4-208ENST00000538827 CYP2A7P20853 494 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 BGNP21810 368 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 ALDH3A1P30838 453 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 EIF2B5Q13144 721 aaKnown RBP13.83□□□□□ -0.2
CD4-208ENST00000538827 FZD2Q14332 565 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 TEAD4Q15561 434 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 PLK5Q496M5 336 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 NEK10Q6ZWH5 1172 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 ISCA2Q86U28 154 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 GPSM1Q86YR5 675 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 DCP2Q8IU60 420 aaKnown RBP13.83□□□□□ -0.2
CD4-208ENST00000538827 NUDCD3Q8IVD9 361 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 C10orf107Q8IVU9 208 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 STAG3L4Q8TBR4 150 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 SREK1Q8WXA9 508 aaKnown RBP13.83□□□□□ -0.2
CD4-208ENST00000538827 SCARF2Q96GP6 870 aaPredicted RBP13.83□□□□□ -0.2
CD4-208ENST00000538827 PDLIM5Q96HC4 596 aaKnown RBP13.83□□□□□ -0.2
CD4-208ENST00000538827 EGFL8Q99944 293 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 CAPS2Q9BXY5 557 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 WWP1Q9H0M0 922 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 GPR27Q9NS67 375 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 DNAJC28Q9NX36 388 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 NUDT4Q9NZJ9 180 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 CD274Q9NZQ7 290 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 COPG2Q9UBF2 871 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 GMEB2Q9UKD1 530 aa13.83□□□□□ -0.2
CD4-208ENST00000538827 PNMA8BQ9ULN7 279 aaPredicted RBP13.83□□□□□ -0.2
CD4-208ENST00000538827 TMEM131Q92545 1883 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 SPTY2D1-AS1A0A0U1RR47 76 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 KLHL33A6NCF5 533 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 TLR4O00206 839 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 IFRD1O00458 451 aaPredicted RBP13.82□□□□□ -0.2
CD4-208ENST00000538827 GUCA1CO95843 209 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 CATP04040 527 aaKnown RBP13.82□□□□□ -0.2
CD4-208ENST00000538827 C8GP07360 202 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 SBK3P0C264 359 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 DHRS4L1P0CG22 281 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 CTSEP14091 401 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 GNSP15586 552 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 AK4P27144 223 aaPredicted RBP13.82□□□□□ -0.2
CD4-208ENST00000538827 ACTR1BP42025 376 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 CSNK1EP49674 416 aaKnown RBP13.82□□□□□ -0.2
CD4-208ENST00000538827 CLCNKAP51800 687 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 ACTR1AP61163 376 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 PLOD1Q02809 727 aaPredicted RBP13.82□□□□□ -0.2
CD4-208ENST00000538827 ILF3Q12906 894 aaKnown RBP eCLIP13.82□□□□□ -0.2
CD4-208ENST00000538827 RPA4Q13156 261 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 SP140Q13342 867 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 CHI3L2Q15782 390 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 ZNF658BQ4V348 819 aaPredicted RBP13.82□□□□□ -0.2
CD4-208ENST00000538827 DUS1LQ6P1R4 473 aaKnown RBP13.82□□□□□ -0.2
CD4-208ENST00000538827 SLC30A9Q6PML9 568 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 XKR5Q6UX68 686 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 ZCCHC23Q6ZST2 131 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 RAB44Q7Z6P3 723 aaPredicted RBP13.82□□□□□ -0.2
CD4-208ENST00000538827 PDZD3Q86UT5 571 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 IQCHQ86VS3 1027 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 FBXO39Q8N4B4 442 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms