RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 EPB41L1Q9H4G0 881 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 LHX6Q9UPM6 363 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 SAR1BQ9Y6B6 198 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 TEX51A0A1B0GUA7 166 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 FAM237BA0A1B0GVD1 139 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 KLHL33A6NCF5 533 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 KRT87PA6NCN2 255 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 OR6C74A6NCV1 312 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 OR5K3A6NET4 321 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 SDR42E2A6NKP2 422 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 DNALI1O14645 258 aaPredicted RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 PRMT5O14744 637 aaPredicted RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 TTI1O43156 1089 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 HCRTR1O43613 425 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 SLCO2B1O94956 709 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 TIAF1O95411 115 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 S1PR4O95977 384 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 GAS8O95995 478 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 FOLR1P15328 257 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 AMD1P17707 334 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 GABRB3P28472 473 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 PEBP1P30086 187 aaKnown RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 CSTF2P33240 577 aaKnown RBP eCLIP8.17□□□□□ -1.1
SPARC-208ENST00000538026 SEPHS1P49903 392 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 CSE1LP55060 971 aaKnown RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 PRAMEP78395 509 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 RPA4Q13156 261 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 LAMB3Q13751 1172 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 GBX1Q14549 363 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 CCSMST1Q4G0I0 132 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 FASTKD1Q53R41 847 aaKnown RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 LYPLAL1Q5VWZ2 237 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 KIAA0930Q6ICG6 404 aaPredicted RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 PRSS42Q7Z5A4 293 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 VASH2Q86V25 355 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 JAMLQ86YT9 394 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 PLXDC1Q8IUK5 500 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 CILP2Q8IUL8 1156 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 DENND6AQ8IWF6 608 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 KLHL7Q8IXQ5 586 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 ADGRF3Q8IZF5 1079 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 AVL9Q8NBF6 648 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 OR52E1Q8NGJ3 308 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 ZFPM2Q8WW38 1151 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 KCNE4Q8WWG9 221 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 ELMO1Q92556 727 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 TFGQ92734 400 aaPredicted RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 NKD1Q969G9 470 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 SLC41A2Q96JW4 573 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 FERD3LQ96RJ6 166 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 DPH1Q9BZG8 443 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 B3GNT4Q9C0J1 378 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 ZNF768Q9H5H4 540 aaKnown RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 TFB2MQ9H5Q4 396 aaKnown RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 STN1Q9H668 368 aaKnown RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 XKR8Q9H6D3 395 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 AKIRIN1Q9H9L7 192 aaPredicted RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 FBXO8Q9NRD0 319 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 HRASLS2Q9NWW9 162 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 SLC39A1Q9NY26 324 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 SPHK1Q9NYA1 384 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 PILRAQ9UKJ1 303 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 ICKQ9UPZ9 632 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 MDC1Q14676 2089 aaKnown RBP8.17□□□□□ -1.1
SPARC-208ENST00000538026 NBASA2RRP1 2371 aa8.17□□□□□ -1.1
SPARC-208ENST00000538026 FLNCQ14315 2725 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 CTAGE9A4FU28 777 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 BTN3A1O00481 513 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 LIN7AO14910 233 aaPredicted RBP8.16□□□□□ -1.1
SPARC-208ENST00000538026 RRP8O43159 456 aaKnown RBP8.16□□□□□ -1.1
SPARC-208ENST00000538026 ZW10O43264 779 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 NIPSNAP2O75323 286 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 CTSBP07858 339 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 GSTM1P09488 218 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 SLC35G4P0C7Q5 338 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 OR56A5P0C7T3 313 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 NELFEP18615 380 aaKnown RBP8.16□□□□□ -1.1
SPARC-208ENST00000538026 POLR2CP19387 275 aaPredicted RBP8.16□□□□□ -1.1
SPARC-208ENST00000538026 RPS3P23396 243 aaKnown RBP eCLIP8.16□□□□□ -1.11e-6■■■□□ 15
SPARC-208ENST00000538026 FMO4P31512 558 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 ABCG1P45844 678 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 ETF1P62495 437 aaKnown RBP8.16□□□□□ -1.1
SPARC-208ENST00000538026 GSTM4Q03013 218 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 DHX9Q08211 1270 aaKnown RBP8.16□□□□□ -1.1
SPARC-208ENST00000538026 CTBP1Q13363 440 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 TRADDQ15628 312 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 ZIC1Q15915 447 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 SOWAHCQ53LP3 525 aaPredicted RBP8.16□□□□□ -1.1
SPARC-208ENST00000538026 CACHD1Q5VU97 1274 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 KIAA1614Q5VZ46 1190 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 HIBCHQ6NVY1 386 aaPredicted RBP8.16□□□□□ -1.1
SPARC-208ENST00000538026 NEPROQ6NW34 567 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 IRGCQ6NXR0 463 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 UNC5AQ6ZN44 842 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 FAM129CQ86XR2 697 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 RASGRP3Q8IV61 690 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 PPIL6Q8IXY8 311 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 SLC22A15Q8IZD6 547 aa8.16□□□□□ -1.1
SPARC-208ENST00000538026 GIMAP7Q8NHV1 300 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms