RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 HNRNPCL3B7ZW38 293 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 SOCS2O14508 198 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PPP1R11O60927 126 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 CD4P01730 458 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 HNRNPCL4P0DMR1 293 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 GRIA1P42261 906 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 CLCN5P51795 746 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 GHRHRQ02643 423 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TIGD6Q17RP2 521 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 CAND1Q86VP6 1230 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 HS6ST3Q8IZP7 471 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PLD5Q8N7P1 536 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ATG4CQ96DT6 458 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 P2RY11Q96G91 374 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PSKH2Q96QS6 385 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 AGAP2Q99490 1192 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MTIF3Q9H2K0 278 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 OR51B5Q9H339 312 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 AMBNQ9NP70 447 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TAS2R13Q9NYV9 303 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 DNAJB9Q9UBS3 223 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 LRATO95237 230 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 IRF1P10914 325 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TCF3P15923 654 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 WARSP23381 471 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 DSTNP60981 165 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 GBE1Q04446 702 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 LRP8Q14114 963 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 KRT33BQ14525 404 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 SEMA3AQ14563 771 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF613Q6PF04 617 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 GPRIN3Q6ZVF9 776 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TRPV1Q8NER1 839 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TADA1Q96BN2 335 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 C1GALT1C1Q96EU7 318 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PPA2Q9H2U2 334 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 POU2F3Q9UKI9 436 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 GTF2A1LQ9UNN4 478 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 CLCA2Q9UQC9 943 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 RBBP6Q7Z6E9 1792 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TTC24A2A3L6 582 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 DPYSL4O14531 572 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ORC5O43913 435 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 SNAP29O95721 258 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ALDOAP04075 364 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 RPS3P23396 243 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 RCVRNP35243 200 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 DCDC1P59894 354 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PPP1R8Q12972 351 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 EFR3AQ14156 821 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PGM5Q15124 567 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TXNRD3NBQ6F5E7 133 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 HHIPL2Q6UWX4 724 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 C15orf39Q6ZRI6 1047 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TRIM48Q8IWZ4 208 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 FSTL5Q8N475 847 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 STAG3L4Q8TBR4 150 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 HERPUD2Q9BSE4 406 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 CHIAQ9BZP6 476 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TRIT1Q9H3H1 467 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MEAF6Q9HAF1 191 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ABCG2Q9UNQ0 655 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 OR5K3A6NET4 321 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 DDTLA6NHG4 134 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MFSD11O43934 449 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 IL1RNP18510 177 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 TTLL4Q14679 1199 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 ANKS3Q6ZW76 656 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 PIWIL3Q7Z3Z3 882 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 OR10T2Q8NGX3 314 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 OR52J3Q8NH60 311 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MFSD3Q96ES6 412 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 MUS81Q96NY9 551 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 RPRD1AQ96P16 312 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 C2orf49Q9BVC5 232 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 GTPBP2Q9BX10 602 aaKnown RBP5.32□□□□□ -1.56
PTPRD-213ENST00000537002 DPEP3Q9H4B8 488 aa5.32□□□□□ -1.56
PTPRD-213ENST00000537002 A0A075B6Q4 140 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 A0A1B0GVM2 712 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 KPNA3O00505 521 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-213ENST00000537002 DHX15O43143 795 aaKnown RBP5.31□□□□□ -1.56
PTPRD-213ENST00000537002 YWHAQP27348 245 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 STAT5AP42229 794 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 KCNA10Q16322 511 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 AP5B1Q2VPB7 878 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 HSD17B12Q53GQ0 312 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 NAPRTQ6XQN6 538 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 CLEC14AQ86T13 490 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 AMIGO1Q86WK6 493 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 GPSM1Q86YR5 675 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 DPP10Q8N608 796 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 Q8N9G6 341 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-213ENST00000537002 NLGN2Q8NFZ4 835 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 OR52E4Q8NGH9 312 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 RADILQ96JH8 1075 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 KCTD15Q96SI1 283 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-213ENST00000537002 NUSAP1Q9BXS6 441 aaKnown RBP5.31□□□□□ -1.56
PTPRD-213ENST00000537002 NHSL1Q5SYE7 1610 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 NPEPPSL1A6NEC2 478 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms