RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TJP3O95049 919 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 MC4RP32245 332 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 NAP1L1P55209 391 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 RWDD2BP57060 319 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SPARCL1Q14515 664 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ZNF449Q6P9G9 518 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 FAM26EQ8N5C1 309 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CLIP3Q96DZ5 547 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SLC25A23Q9BV35 468 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 OR52A5Q9H2C5 316 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 COG4Q9H9E3 785 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 VPS37BQ9H9H4 285 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ZDHHC3Q9NYG2 299 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PCDHGA9Q9Y5G4 932 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CCL22O00626 93 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 DDX3YO15523 660 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 LDB2O43679 373 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 RAB40ALP0C0E4 278 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PRDX3P30048 256 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PREPP48147 710 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CD151P48509 253 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CCL11P51671 97 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PGDP52209 483 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CHAF1BQ13112 559 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ZRANB3Q5FWF4 1079 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PLEKHS1Q5SXH7 462 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PRAMEF17Q5VTA0 474 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CPZQ66K79 652 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 DSELQ8IZU8 1212 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ING2Q9H160 280 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 TFB2MQ9H5Q4 396 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SNX7Q9UNH6 387 aa19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 EPN1Q9Y6I3 576 aaPredicted RBP19.11■□□□□ 0.65
TNFRSF1B-204ENST00000536782 IGLV3-16A0A075B6K0 115 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 TRBV5-4A0A0C4DH59 114 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 RCCD1A6NED2 376 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 TTLL8A6PVC2 850 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 TMEM150CB9EJG8 249 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 BTN3A3O00478 584 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 IPO7O95373 1038 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 MSL3P1P0C860 447 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ACRV1P26436 265 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CDKN1CP49918 316 aaPredicted RBP19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ABRQ12979 859 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 RPA4Q13156 261 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 LCN10Q6JVE6 187 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 AADACL2Q6P093 401 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 TAS2R42Q7RTR8 314 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ENDOVQ8N8Q3 282 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 OR52E1Q8NGJ3 308 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 OR1L3Q8NH93 324 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 DNAJC1Q96KC8 554 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 NLNQ9BYT8 704 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 MVB12BQ9H7P6 319 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ACTR5Q9H9F9 607 aaPredicted RBP19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 DUSP10Q9Y6W6 482 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 NOTCH2Q04721 2471 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 HIVEP3Q5T1R4 2406 aa19.1■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SOWAHDA6NJG2 315 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 BTN3A1O00481 513 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ST6GAL1P15907 406 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CYP2A7P20853 494 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PDHA2P29803 388 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 RORAP35398 523 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PTGIRP43119 386 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ZNF658BQ4V348 819 aaPredicted RBP19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ARHGEF18Q6ZSZ5 1173 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SERPINA9Q86WD7 417 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 AMIGO1Q86WK6 493 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 KLHDC8BQ8IXV7 354 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 EFCAB3Q8N7B9 438 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PHC3Q8NDX5 983 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ADAMTS17Q8TE56 1095 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ALG3Q92685 438 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PITPNM3Q9BZ71 974 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SLC7A5P2Q9GIP4 190 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 MLXIPLQ9NP71 852 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 NLE1Q9NVX2 485 aaPredicted RBP19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SERTAD3Q9UJW9 196 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 TCFL5Q9UL49 500 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ESPL1Q14674 2120 aa19.09■□□□□ 0.65
TNFRSF1B-204ENST00000536782 BTNL10A8MVZ5 291 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 C2orf74A8MZ97 194 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 H7C0S8 307 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 VPS4BO75351 444 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PTMAP06454 111 aaKnown RBP19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 GSTM1P09488 218 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 GP1BBP13224 206 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TPH1P17752 444 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 LMAN1P49257 510 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 GSTM4Q03013 218 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PARP6Q2NL67 630 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ZNF789Q5FWF6 425 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PAPD7Q5XG87 772 aaKnown RBP19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 KCTD11Q693B1 232 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TMTC1Q8IUR5 882 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 SYTL1Q8IYJ3 562 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TFGQ92734 400 aaPredicted RBP19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TRAPPC9Q96Q05 1148 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PANX2Q96RD6 677 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms