RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ZBTB17Q13105 803 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 MFSD6Q6ZSS7 791 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 TLK2Q86UE8 772 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 LONP2Q86WA8 852 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 COMMD2Q86X83 199 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 IQCA1Q86XH1 822 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 CFAP206Q8IYR0 622 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 MAML2Q8IZL2 1156 aaPredicted RBP5.15□□□□□ -1.59
PRKDC-208ENST00000536710 KCNE4Q8WWG9 221 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 EXT2Q93063 718 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 VOPP1Q96AW1 172 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 OTUB1Q96FW1 271 aaPredicted RBP5.15□□□□□ -1.59
PRKDC-208ENST00000536710 RMDN2Q96LZ7 410 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 CCDC114Q96M63 670 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 EGFL8Q99944 293 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 DESI2Q9BSY9 194 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 KATNB1Q9BVA0 655 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 GAREM1Q9H706 876 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 MYNNQ9NPC7 610 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 TBC1D7Q9P0N9 293 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 DLGAP4Q9Y2H0 992 aa5.15□□□□□ -1.59
PRKDC-208ENST00000536710 CLEC18AA5D8T8 446 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 MAGEA13PA6NCF6 341 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 OR6C76A6NM76 312 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 C4orf47A7E2U8 309 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 ACSL3O95573 720 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 ACP2P11117 423 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 CSF2RAP15509 400 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 MCCP23508 829 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 HOXC8P31273 242 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 MAPK12P53778 367 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 DSCR9P59020 149 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 RPS18P62269 152 aaKnown RBP5.14□□□□□ -1.59
PRKDC-208ENST00000536710 KRT83P78385 493 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 PNRC1Q12796 327 aaPredicted RBP5.14□□□□□ -1.59
PRKDC-208ENST00000536710 PTK6Q13882 451 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 STXBP5Q5T5C0 1151 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 MFSD12Q6NUT3 480 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 PLXDC2Q6UX71 529 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 PACS1Q6VY07 963 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 C11orf57Q6ZUT1 292 aaPredicted RBP5.14□□□□□ -1.59
PRKDC-208ENST00000536710 GLRX5Q86SX6 157 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 SPATA2LQ8IUW3 424 aaPredicted RBP5.14□□□□□ -1.59
PRKDC-208ENST00000536710 CEP57L1Q8IYX8 460 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 SIX6OS1Q8N1H7 587 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 MUC20Q8N307 709 aaPredicted RBP5.14□□□□□ -1.59
PRKDC-208ENST00000536710 CLEC18CQ8NCF0 446 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 MOB3AQ96BX8 217 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 MED30Q96HR3 178 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 SLX1AQ9BQ83 275 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 POLR3CQ9BUI4 534 aaPredicted RBP5.14□□□□□ -1.59
PRKDC-208ENST00000536710 FZD8Q9H461 694 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 ARGLU1Q9NWB6 273 aaPredicted RBP5.14□□□□□ -1.59
PRKDC-208ENST00000536710 PTTG2Q9NZH5 202 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 ABT1Q9ULW3 272 aaKnown RBP5.14□□□□□ -1.59
PRKDC-208ENST00000536710 NME7Q9Y5B8 376 aa5.14□□□□□ -1.59
PRKDC-208ENST00000536710 TTC3P53804 2025 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 TMEM221A6NGB7 291 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 OR10H2O60403 315 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 SYNCRIPO60506 623 aaKnown RBP5.13□□□□□ -1.59
PRKDC-208ENST00000536710 CBLP22681 906 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 MPZP25189 248 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 PTPN3P26045 913 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 CRKLP46109 303 aaKnown RBP5.13□□□□□ -1.59
PRKDC-208ENST00000536710 ASCL1P50553 236 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 DUOXA1Q1HG43 343 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 MDH1BQ5I0G3 518 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 TCTE1Q5JU00 501 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 MPP7Q5T2T1 576 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 GRTP1Q5TC63 336 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 UNQ6126/PRO20091Q6UXV3 157 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 CRYBG2Q8N1P7 616 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 ARHGAP24Q8N264 748 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 ZNF611Q8N823 705 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 L3MBTL4Q8NA19 623 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 PPFIBP2Q8ND30 876 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 HES6Q96HZ4 224 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 ABHD8Q96I13 439 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 MUS81Q96NY9 551 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 FEVQ99581 238 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 CPNE1Q99829 537 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 TRAF4Q9BUZ4 470 aaPredicted RBP5.13□□□□□ -1.59
PRKDC-208ENST00000536710 GTPBP2Q9BX10 602 aaKnown RBP5.13□□□□□ -1.59
PRKDC-208ENST00000536710 XAB2Q9HCS7 855 aaKnown RBP5.13□□□□□ -1.59
PRKDC-208ENST00000536710 ABCF3Q9NUQ8 709 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 POLLQ9UGP5 575 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 ZFP37Q9Y6Q3 630 aaPredicted RBP5.13□□□□□ -1.59
PRKDC-208ENST00000536710 CGNL1Q0VF96 1302 aa5.13□□□□□ -1.59
PRKDC-208ENST00000536710 IGHV4OR15-8A0A075B7B6 117 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 A0A0G2JNG1 304 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 TEX13DA0A0J9YY54 714 aaPredicted RBP5.12□□□□□ -1.59
PRKDC-208ENST00000536710 CCDC188H7C350 402 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 CLIC2O15247 247 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 GBAP04062 536 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 ZNF23P17027 643 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 CDC25CP30307 473 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 LIMK1P53667 647 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 POLR2LP62875 67 aaKnown RBP5.12□□□□□ -1.59
PRKDC-208ENST00000536710 KIR2DS5Q14953 304 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 KIF19Q2TAC6 998 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms