RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 HSF2Q03933 536 aa17.89■□□□□ 0.46
SFSWAP-203ENST00000535236 RFTN1Q14699 578 aaPredicted RBP17.89■□□□□ 0.46
SFSWAP-203ENST00000535236 ADGRD1Q6QNK2 874 aa17.89■□□□□ 0.46
SFSWAP-203ENST00000535236 ENPP7Q6UWV6 458 aa17.89■□□□□ 0.46
SFSWAP-203ENST00000535236 ZBED6CLQ96FA7 236 aaPredicted RBP17.89■□□□□ 0.46
SFSWAP-203ENST00000535236 CEP295NLQ96MC4 621 aa17.89■□□□□ 0.46
SFSWAP-203ENST00000535236 NSMCE3Q96MG7 304 aa17.89■□□□□ 0.46
SFSWAP-203ENST00000535236 WDR26Q9H7D7 661 aa17.89■□□□□ 0.46
SFSWAP-203ENST00000535236 ATXN10Q9UBB4 475 aa17.89■□□□□ 0.46
SFSWAP-203ENST00000535236 MAN2B2Q9Y2E5 1009 aa17.89■□□□□ 0.46
SFSWAP-203ENST00000535236 FAM240BA0A1B0GVZ2 78 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 TPD52L2O43399 206 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 DHPSP49366 369 aaPredicted RBP17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 C2orf27AQ580R0 203 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 TMEM164Q5U3C3 297 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 ZZZ3Q8IYH5 903 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 PMM1Q92871 262 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 GTPBP3Q969Y2 492 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 FUBP3Q96I24 572 aaKnown RBP eCLIP17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 ZNF514Q96K75 400 aaPredicted RBP17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 GPATCH1Q9BRR8 931 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 PLGP00747 810 aaPredicted RBP17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 HSD17B2P37059 387 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 UBAP2Q5T6F2 1119 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 FSTL4Q6MZW2 842 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 SMARCD3Q6STE5 483 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 SLC22A18Q96BI1 424 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 CST11Q9H112 138 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 C11orf16Q9NQ32 467 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 IL36AQ9UHA7 158 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 TESMINQ9Y4I5 508 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 A0A1W2PRU2 124 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 SLC7A4O43246 635 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 TIE1P35590 1138 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 SGCBQ16585 318 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 INAVAQ3KP66 663 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 METTL21CQ5VZV1 264 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 CYP2U1Q7Z449 544 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 HBEGFQ99075 208 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 IFT46Q9NQC8 304 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 DNAAF2Q9NVR5 837 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 MGAT4AQ9UM21 535 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 PCDHGA3Q9Y5H0 932 aa17.89■□□□□ 0.45
SFSWAP-203ENST00000535236 C2CD4BA6NLJ0 364 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 PIP5K1BO14986 540 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 CHP2O43745 196 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 TPST2O60704 377 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 PTP4A2Q12974 167 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 IFI44LQ53G44 452 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 UTS2BQ765I0 119 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 DIRAS2Q96HU8 199 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 SYT17Q9BSW7 474 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 C11orf49Q9H6J7 331 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 RNF121Q9H920 327 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 CARS2Q9HA77 564 aaKnown RBP17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 A0A0G2JLL6 359 aaPredicted RBP17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 ALPPP05187 535 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 CBX3Q13185 183 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 LRRC32Q14392 662 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 VWA5B1Q5TIE3 1220 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 PLET1Q6UQ28 207 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 PRRT2Q7Z6L0 340 aaPredicted RBP17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 CLPTM1LQ96KA5 538 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 IFT27Q9BW83 186 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 GSC2O15499 205 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 TULP3O75386 442 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 ZNF432O94892 652 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 SLC22A15Q8IZD6 547 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 ZNF570Q96NI8 536 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 NUSAP1Q9BXS6 441 aaKnown RBP17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 TRPV5Q9NQA5 729 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 PNO1Q9NRX1 252 aaKnown RBP17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 CLDND1Q9NY35 253 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 ATRNO75882 1429 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 WNT9AO14904 365 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 ANGPTL1O95841 491 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 AGXTP21549 392 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 FSHRP23945 695 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 PDGFRLQ15198 375 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 SMPD3Q9NY59 655 aaPredicted RBP17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 STOML2Q9UJZ1 356 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 CDC14AQ9UNH5 594 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 CPED1A4D0V7 1026 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 PRORSD1PA6NEY8 169 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 C9J4A7 227 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 C9JVG2 144 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 hCG_2039718K7EN88 272 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 PSMD9O00233 223 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 WNT7AO00755 349 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 NCBP2P52298 156 aaKnown RBP eCLIP17.88■□□□□ 0.458e-14■■■■□ 21.9
SFSWAP-203ENST00000535236 AP3S2P59780 193 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 RPS14P62263 151 aaKnown RBP17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 RASGEF1BQ0VAM2 473 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 SLC5A9Q2M3M2 681 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 ANKRD22Q5VYY1 191 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 PAOXQ6QHF9 649 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 AHSA2Q719I0 299 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 KCT2Q8NC54 265 aa17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 TTLQ8NG68 377 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms