RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 TMEM135Q86UB9 458 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 BPHLQ86WA6 291 aaPredicted RBP9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 PPP1R3BQ86XI6 285 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 SYCE1Q8N0S2 351 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 CARFQ8N187 725 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 UBL4BQ8N7F7 174 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 FAM71DQ8N9W8 422 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 GALNT6Q8NCL4 622 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 HM13Q8TCT9 377 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 STYXQ8WUJ0 223 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 RNF31Q96EP0 1072 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 CDKN2AIPNLQ96HQ2 116 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 DNAJC1Q96KC8 554 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 RMDN2Q96LZ7 410 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 C12orf66Q96MD2 445 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 CCM2Q9BSQ5 444 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 SLC29A3Q9BZD2 475 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 OR52A5Q9H2C5 316 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 FAM96AQ9H5X1 160 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 ZDHHC3Q9NYG2 299 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 IMPACTQ9P2X3 320 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 SLC24A2Q9UI40 661 aa9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 SNRNP200O75643 2136 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-203ENST00000534830 CCDC88CQ9P219 2028 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 CDC14CA4D256 554 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 GOLGA6L9A6NEM1 432 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 MROH6A6NGR9 719 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 CCL22O00626 93 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 KATNA1O75449 491 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 DNAJB5O75953 348 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 AP2A1O95782 977 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 FTCDO95954 541 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 PRSS56P0CW18 603 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 RALBP11234 206 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 ITGALP20701 1170 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 NDUFS1P28331 727 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 CDC25BP30305 580 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 MC4RP32245 332 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 DLSTP36957 453 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 KPNA2P52292 529 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 PMS2P54278 862 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 LAMB3Q13751 1172 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 OASLQ15646 514 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 INPP5JQ15735 1006 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 PRR30Q53SZ7 412 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 PWWP2BQ6NUJ5 590 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 DUS1LQ6P1R4 473 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 CYB5D1Q6P9G0 228 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 CERS6Q6ZMG9 384 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 ZNF517Q6ZMY9 492 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 KIAA1328Q86T90 577 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 RASGRP3Q8IV61 690 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 CFAP206Q8IYR0 622 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 RNF10Q8N5U6 811 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 SIDT2Q8NBJ9 832 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 MARVELD3Q96A59 401 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 C5orf34Q96MH7 638 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 COPS8Q99627 209 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 TMEM121Q9BTD3 319 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 LRRC40Q9H9A6 602 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 AKIRIN1Q9H9L7 192 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 PDE7BQ9NP56 450 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 LHX9Q9NQ69 397 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 IMP3Q9NV31 184 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 HRASLS2Q9NWW9 162 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 LUZP4Q9P127 313 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 CRLS1Q9UJA2 301 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 CROTQ9UKG9 612 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 BTRCQ9Y297 605 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 HEBP2Q9Y5Z4 205 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 CAPN6Q9Y6Q1 641 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 COLEC10Q9Y6Z7 277 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 ADGRG4Q8IZF6 3080 aa9.79□□□□□ -0.84
CLSTN3-203ENST00000534830 FER1L5A0AVI2 2057 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 ARHGAP10A1A4S6 786 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 OR6C74A6NCV1 312 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 PSMD3O43242 534 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 HNRNPRO43390 633 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 ZBTB11O95625 1053 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 MT-ND3P03897 115 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 POLBP06746 335 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 EBLN1P0CF75 366 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 PRF1P14222 555 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 TPH1P17752 444 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 PDHA2P29803 388 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 CD151P48509 253 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 PGDP52209 483 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 HSD11B2P80365 405 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 ACY1Q03154 408 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 KIF5AQ12840 1032 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 TUBB3Q13509 450 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 KCNAB1Q14722 419 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 PLCL1Q15111 1095 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 P3H1Q32P28 736 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 DNTTIP2Q5QJE6 756 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 ARHGEF18Q6ZSZ5 1173 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 SERPINA9Q86WD7 417 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 OOSP2Q86WS3 158 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 PIANPQ8IYJ0 282 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms