RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	MESD	Q14696	234 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	KCNAB1	Q14722	419 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	CHRNA6	Q15825	494 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	TAZ	Q16635	292 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	TBCEL	Q5QJ74	424 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	TMEM220	Q6QAJ8	160 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	CEP112	Q8N8E3	955 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	GPR150	Q8NGU9	434 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	SLC35G2	Q8TBE7	412 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	RNF31	Q96EP0	1072 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	RUFY1	Q96T51	708 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	INSM2	Q96T92	566 aa	Predicted RBP	11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	VAT1	Q99536	393 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	KIR3DX1	Q9H7L2	352 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	UGT1A7	Q9HAW7	530 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	UGT1A10	Q9HAW8	530 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	UGT1A8	Q9HAW9	530 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	ACSS2	Q9NR19	701 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	HRASLS2	Q9NWW9	162 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	SLC24A2	Q9UI40	661 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	ZNF451	Q9Y4E5	1061 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	MRFAP1	Q9Y605	127 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	GLYATL1P3	A0A0U1RQE8	302 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	MGAT4D	A6NG13	374 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	GAPDHS	O14556	408 aa	Predicted RBP	11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	KLF4	O43474	513 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	SLC4A1	P02730	911 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	HLA-DPA1	P20036	260 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	SLC1A1	P43005	524 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	CCL11	P51671	97 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	WASHC5	Q12768	1159 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	GPS2	Q13227	327 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	IL10RA	Q13651	578 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	NFE2L1	Q14494	772 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	SLC1A5	Q15758	541 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	WHAMMP3	Q1A5X7	153 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	LONRF2	Q1L5Z9	754 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	SIRPB2	Q5JXA9	342 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	PLEKHS1	Q5SXH7	462 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	TMTC4	Q5T4D3	741 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	GPRC6A	Q5T6X5	926 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	NPNT	Q6UXI9	565 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	CERS6	Q6ZMG9	384 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	OOSP2	Q86WS3	158 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	RHOT2	Q8IXI1	618 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	SYCE1	Q8N0S2	351 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	ZNF511	Q8NB15	262 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	GLIS1	Q8NBF1	620 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	SLC38A9	Q8NBW4	561 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	OR2L2	Q8NH16	312 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	SSC4D	Q8WTU2	575 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	TFB1M	Q8WVM0	346 aa	Known RBP	11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	MRGPRX2	Q96LB1	330 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	LINC00615	Q96LM1	132 aa	Predicted RBP	11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	FCRL5	Q96RD9	977 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	C19orf43	Q9BQ61	176 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	NLN	Q9BYT8	704 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	ETNK1	Q9HBU6	452 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	CDC23	Q9UJX2	597 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	PSMD13	Q9UNM6	376 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	PKP3	Q9Y446	797 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	SAR1B	Q9Y6B6	198 aa		11.24	□□□□□ -0.61
CTNND1-238	ENST00000534647	AGAP14	A8MT82	685 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	MEN1	O00255	615 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	MATN2	O00339	956 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	DYNC1I1	O14576	645 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	DPM1	O60762	260 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	DDAH2	O95865	285 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	NDUFS1	P28331	727 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	CA5A	P35218	305 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	RORA	P35398	523 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	CDKN2B	P42772	138 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	RPS18	P62269	152 aa	Known RBP	11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	CKAP4	Q07065	602 aa	Known RBP	11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	XRCC4	Q13426	336 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	TFDP2	Q14188	446 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	PLCL1	Q15111	1095 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	INPP5J	Q15735	1006 aa	Predicted RBP	11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	GPR19	Q15760	415 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	PPP2R5E	Q16537	467 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	NADK2	Q4G0N4	442 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	BCL7A	Q4VC05	210 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	FAM182A	Q5T1J6	154 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	CPZ	Q66K79	652 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	JMJD6	Q6NYC1	403 aa	Predicted RBP	11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	FAM151B	Q6UXP7	276 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	MED25	Q71SY5	747 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	RFX6	Q8HWS3	928 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	TMEM126B	Q8IUX1	230 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	RHOT1	Q8IXI2	618 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	DSEL	Q8IZU8	1212 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	ZNF398	Q8TD17	642 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	CPT1B	Q92523	772 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	MR1	Q95460	341 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	CARD6	Q9BX69	1037 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	CHST8	Q9H2A9	424 aa		11.23	□□□□□ -0.61
CTNND1-238	ENST00000534647	C1GALT1	Q9NS00	363 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms