RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 CASP14P31944 242 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 GNPDA1P46926 289 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 PEX5P50542 639 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 SCNN1BP51168 640 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 BLKP51451 505 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 VAMP7P51809 220 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 AP3M2P53677 418 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 GFERP55789 205 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC8A3P57103 927 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 KRT83P78385 493 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 HMGN5P82970 282 aaKnown RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 ARF5P84085 180 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 CCDC15Q0P6D6 951 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 NME3Q13232 169 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 NFATC2Q13469 925 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 EIF4EBP2Q13542 120 aaPredicted RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 DNASE1L3Q13609 305 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 CUL4BQ13620 913 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 BECN1Q14457 450 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 PTPRRQ15256 657 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 MAN2A1Q16706 1144 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 KNOP1Q1ED39 458 aaKnown RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 SMTNL2Q2TAL5 461 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 FAM214AQ32MH5 1076 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 ZNF805Q5CZA5 627 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 RABGAP1LQ5R372 815 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 PAPD7Q5XG87 772 aaKnown RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 TIGD7Q6NT04 549 aaPredicted RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM71Q6P5X7 295 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 LCLAT1Q6UWP7 414 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 CEACAM20Q6UY09 585 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 CERS6Q6ZMG9 384 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 STXBP4Q6ZWJ1 553 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 BRAPQ7Z569 592 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 CUZD1Q86UP6 607 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 GLCCI1Q86VQ1 547 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 C17orf82Q86X59 251 aaPredicted RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 THNSL2Q86YJ6 484 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 C12orf56Q8IXR9 622 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 ZNF683Q8IZ20 524 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 DEFB106AQ8N104 65 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 NAGSQ8N159 534 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 ESX1Q8N693 406 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 ZNF557Q8N988 423 aaPredicted RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 GLB1L3Q8NCI6 653 aaPredicted RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 CCDC112Q8NEF3 446 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 OR6C4Q8NGE1 309 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 OR56A4Q8NGH8 313 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 CXorf40AQ8TE69 158 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 ITLN2Q8WWU7 325 aaPredicted RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 IRGQQ8WZA9 623 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 NCSTNQ92542 709 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 PNPLA2Q96AD5 504 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 FAM149B1Q96BN6 582 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 DHX58Q96C10 678 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 PPP1R16AQ96I34 528 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 BTN2A3PQ96KV6 586 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 TBATAQ96M53 351 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 SERPINB11Q96P15 392 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 EFHD1Q9BUP0 239 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 ULBP3Q9BZM4 244 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 ACTL8Q9H568 366 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 UPF2Q9HAU5 1272 aaKnown RBP2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 ACP6Q9NPH0 428 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 CNGB3Q9NQW8 809 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 FBXO8Q9NRD0 319 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 ING3Q9NXR8 418 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 PDP2Q9P2J9 529 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 HESX1Q9UBX0 185 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 LNPEPQ9UIQ6 1025 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 TBC1D30Q9Y2I9 924 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 ATP8A1Q9Y2Q0 1164 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM98Q9Y2Y6 226 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 CSAG2Q9Y5P2 127 aa2.94□□□□□ -1.94
CHMP4A-208ENST00000534106 FN1P02751 2386 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TNRC6AQ8NDV7 1962 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 A0A0A6YYK5 440 aaPredicted RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 A0A0U1RQS6 177 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CENPVL1A0A0U1RR11 272 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TCRBV16S1A1N1A0A5B0 115 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CCDC78A2IDD5 438 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 DRGXA6NNA5 263 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM110-MUSTN1A8MSY1 372 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 H3BQV1 296 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 M0QYV0 167 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 RNASET2O00584 256 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 IKBKBO14920 756 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 INPP4BO15327 924 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 HOXA3O43365 443 aaPredicted RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 EPB41L2O43491 1005 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 DPM1O60762 260 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 LRCH4O75427 683 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CLDN11O75508 207 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 SPAG6O75602 509 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CEACAM4O75871 244 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 DNAJC8O75937 253 aaPredicted RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 RECQL5O94762 991 aaPredicted RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 NDUFA10O95299 355 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 PIGNO95427 931 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 IGLV3-25P01717 112 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms