RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 UCNP55089 124 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 RHDQ02161 417 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 ACVR1Q04771 509 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 GPS2Q13227 327 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 BOP1Q14137 746 aaKnown RBP9.36□□□□□ -0.91
SSBP3-215ENST00000533946 GRB7Q14451 532 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 GSE1Q14687 1217 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 DEFB110Q30KQ9 67 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 C16orf46Q6P387 395 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 PPP1R21Q6ZMI0 780 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 ZNF662Q6ZS27 426 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 CAND1Q86VP6 1230 aaKnown RBP9.36□□□□□ -0.91
SSBP3-215ENST00000533946 PTRH1Q86Y79 214 aaKnown RBP9.36□□□□□ -0.91
SSBP3-215ENST00000533946 SHISA5Q8N114 240 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 SLC35F6Q8N357 371 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 OR6P1Q8NGX9 317 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 HM13Q8TCT9 377 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 CT55Q8WUE5 264 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 PWWP2AQ96N64 755 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 IL17FQ96PD4 163 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 ULBP3Q9BZM4 244 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 ZCCHC2Q9C0B9 1178 aaKnown RBP9.36□□□□□ -0.91
SSBP3-215ENST00000533946 STN1Q9H668 368 aaKnown RBP9.36□□□□□ -0.91
SSBP3-215ENST00000533946 SYNPO2LQ9H987 977 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 TREX1Q9NSU2 369 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 AKAP7Q9P0M2 348 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-215ENST00000533946 LNPEPQ9UIQ6 1025 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 NEU2Q9Y3R4 380 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 NFS1Q9Y697 457 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 CYSRT1A8MQ03 144 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 GOLGA8MH3BSY2 632 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 FGF5P12034 268 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 VCLP18206 1134 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 PRDX3P30048 256 aaKnown RBP9.35□□□□□ -0.91
SSBP3-215ENST00000533946 STIP1P31948 543 aaKnown RBP9.35□□□□□ -0.91
SSBP3-215ENST00000533946 FDFT1P37268 417 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 HADHAP40939 763 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 STAT5AP42229 794 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 BASP1P80723 227 aaKnown RBP9.35□□□□□ -0.91
SSBP3-215ENST00000533946 CDH17Q12864 832 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 NFATC3Q12968 1075 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 LAMB3Q13751 1172 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 ERV3-1Q14264 604 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 DEFB109BQ30KR1 87 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 GPR33Q49SQ1 333 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 CTSL3PQ5NE16 218 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 DNTTIP2Q5QJE6 756 aaKnown RBP9.35□□□□□ -0.91
SSBP3-215ENST00000533946 TMEM164Q5U3C3 297 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 CEACAM20Q6UY09 585 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 UNC5AQ6ZN44 842 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 TAX1BP1Q86VP1 789 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 RASGRP3Q8IV61 690 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 NLGN4XQ8N0W4 816 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 LINC01555Q8NAE3 123 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 AVL9Q8NBF6 648 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 NLGN4YQ8NFZ3 816 aaPredicted RBP9.35□□□□□ -0.91
SSBP3-215ENST00000533946 OR4L1Q8NH43 312 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 OR1L3Q8NH93 324 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 ELMO1Q92556 727 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 TFGQ92734 400 aaPredicted RBP9.35□□□□□ -0.91
SSBP3-215ENST00000533946 ULK4Q96C45 1275 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 ZNF501Q96CX3 271 aaPredicted RBP9.35□□□□□ -0.91
SSBP3-215ENST00000533946 SLC30A3Q99726 388 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 DPYSL5Q9BPU6 564 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 MENTQ9BUN1 341 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 ASPSCR1Q9BZE9 553 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 TSGA10Q9BZW7 698 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 GPN2Q9H9Y4 310 aaPredicted RBP9.35□□□□□ -0.91
SSBP3-215ENST00000533946 GRPEL1Q9HAV7 217 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 ACSL5Q9ULC5 683 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 DRG1Q9Y295 367 aaKnown RBP9.35□□□□□ -0.91
SSBP3-215ENST00000533946 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 RPS6KL1Q9Y6S9 549 aa9.35□□□□□ -0.91
SSBP3-215ENST00000533946 GSAPA4D1B5 854 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 E7EVH7 732 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 KCNJ13O60928 360 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 KATNA1O75449 491 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 DNAJB5O75953 348 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 PDGFAP04085 211 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 CAPN1P07384 714 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 ADRA1DP25100 572 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 DLSTP36957 453 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 SNRPNP63162 240 aaKnown RBP9.34□□□□□ -0.91
SSBP3-215ENST00000533946 MRPS25P82663 173 aaKnown RBP9.34□□□□□ -0.91
SSBP3-215ENST00000533946 C19orf57Q0VDD7 668 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 CHAF1BQ13112 559 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 TUBB3Q13509 450 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 IL10RAQ13651 578 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 KCNJ11Q14654 390 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 DRICH1Q6PGQ1 229 aaPredicted RBP9.34□□□□□ -0.91
SSBP3-215ENST00000533946 C6orf15Q6UXA7 325 aaPredicted RBP9.34□□□□□ -0.91
SSBP3-215ENST00000533946 CDHR3Q6ZTQ4 885 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 D2HGDHQ8N465 521 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 CCDC89Q8N998 374 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 SIDT2Q8NBJ9 832 aaKnown RBP9.34□□□□□ -0.91
SSBP3-215ENST00000533946 CFAP61Q8NHU2 1237 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 LCN9Q8WX39 176 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 STARD8Q92502 1023 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 CPT1BQ92523 772 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 MED8Q96G25 268 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms