RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 GFAPP14136 432 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 GM2AP17900 193 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 BGNP21810 368 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 ITPKAP23677 461 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 MAOBP27338 520 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 HTR1BP28222 390 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 HOXD12P35452 270 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 HK2P52789 917 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 DNAJB13P59910 316 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 RACK1P63244 317 aaKnown RBP10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 CDK3Q00526 305 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 B4GALNT1Q00973 533 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 SP140Q13342 867 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 BOP1Q14137 746 aaKnown RBP10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 FGL2Q14314 439 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 DET1Q7L5Y6 550 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 ISCA2Q86U28 154 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 C10orf107Q8IVU9 208 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 SKA2Q8WVK7 121 aaPredicted RBP10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 ANKRD49Q8WVL7 239 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 ELMO1Q92556 727 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 GPR78Q96P69 363 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 EBF2Q9HAK2 575 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 SUSD2Q9UGT4 822 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 MED16Q9Y2X0 877 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 HS3ST3A1Q9Y663 406 aa10.73□□□□□ -0.69
CCDC90B-218ENST00000533761 DOCK9Q9BZ29 2069 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 LRRK1Q38SD2 2015 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 OR2AG2A6NM03 316 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 IQCF5A8MTL0 148 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 G3V2L1 256 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 KCNJ13O60928 360 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 TGDSO95455 350 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 SOD1P00441 154 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 HIST1H2AGP0C0S8 130 aaPredicted RBP10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 HIST1H2ADP20671 130 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 AOAHP28039 575 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 TRIM23P36406 574 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 SEC24CP53992 1094 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 TIAL1Q01085 375 aaKnown RBP eCLIP10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 HSPA14Q0VDF9 509 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 OVGP1Q12889 678 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 IRF4Q15306 451 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 WSCD2Q2TBF2 565 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 LCE3BQ5TA77 95 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 RABEPKQ7Z6M1 372 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 GPSM1Q86YR5 675 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 SYT12Q8IV01 421 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 WDR75Q8IWA0 830 aaKnown RBP10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 PNPLA1Q8N8W4 532 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 TP53I13Q8NBR0 393 aaPredicted RBP10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 TMEM145Q8NBT3 493 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 EEF1AKMT1Q8WVE0 214 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 GLMNQ92990 594 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 SKA1Q96BD8 255 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 SGF29Q96ES7 293 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 COX14Q96I36 57 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 HIST1H2AHQ96KK5 128 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 LINC00615Q96LM1 132 aaPredicted RBP10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 HIST1H2AJQ99878 128 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 ORAI3Q9BRQ5 295 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 H2AFJQ9BTM1 129 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 TEX101Q9BY14 249 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 TRIM55Q9BYV6 548 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 OR2AG1Q9H205 316 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 C12orf65Q9H3J6 166 aaKnown RBP10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 AASDHPPTQ9NRN7 309 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 FGFR1OP2Q9NVK5 253 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 ZNF358Q9NW07 568 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 NUDT4Q9NZJ9 180 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 TNPO3Q9Y5L0 923 aaKnown RBP10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 PRSS21Q9Y6M0 314 aa10.72□□□□□ -0.69
CCDC90B-218ENST00000533761 SUPT3HB4E1H0 165 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 GIPC1O14908 333 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 SLC16A5O15375 505 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 BCAT2O15382 392 aaPredicted RBP10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 ZBTB14O43829 449 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 NUAK1O60285 661 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 EDF1O60869 148 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 MTX2O75431 263 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 SUPT3HO75486 399 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 HSPA4LO95757 839 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 HOXC4P09017 264 aaPredicted RBP10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 MPC1LP0DKB6 136 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 ITGB6P18564 788 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 CYP2A7P20853 494 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 MAP4P27816 1152 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 CD38P28907 300 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 AFF3P51826 1226 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 DLG1Q12959 904 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 RPA4Q13156 261 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 INPP5AQ14642 412 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 CDKL4Q5MAI5 379 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 LAIR1Q6GTX8 287 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 METTL2BQ6P1Q9 378 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 TMEM220Q6QAJ8 160 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 TMEM207Q6UWW9 146 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 FAM47EQ6ZV65 393 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 LRRTM4Q86VH4 590 aa10.71□□□□□ -0.69
CCDC90B-218ENST00000533761 IQCHQ86VS3 1027 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms