RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CBX3Q13185 183 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 LRRC26Q2I0M4 334 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 LIN52Q52LA3 116 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 RNF220Q5VTB9 566 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 SLC9A4Q6AI14 798 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 C11orf88Q6PI97 169 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 ATG14Q6ZNE5 492 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 RASGRP3Q8IV61 690 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 BHLHE22Q8NFJ8 381 aaPredicted RBP11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 PANX1Q96RD7 426 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 NDC1Q9BTX1 674 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 ARHGEF3Q9NR81 526 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 ABCB10Q9NRK6 738 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 FETUBQ9UGM5 382 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 ZNF490Q9ULM2 529 aaPredicted RBP11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 TJP1Q07157 1748 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 FAM221BA6H8Z2 402 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 TRBC1P01850 177 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 CFHP08603 1231 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 CCNA2P20248 432 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 MAPK12P53778 367 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 PHF19Q5T6S3 580 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 BROXQ5VW32 411 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 ZCCHC23Q6ZST2 131 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 TRIM74Q86UV6 250 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 TRIM73Q86UV7 250 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 OR2T3Q8NH03 318 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 SLC35B2Q8TB61 432 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 ITFG1Q8TB96 612 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 HCAR2Q8TDS4 363 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 LRRN4Q8WUT4 740 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 PIGKQ92643 395 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 TRMT2BQ96GJ1 504 aaKnown RBP11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 NARS2Q96I59 477 aaKnown RBP11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 OR2M4Q96R27 311 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 TFB2MQ9H5Q4 396 aaKnown RBP11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 CFL2Q9Y281 166 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 RFPL2O75678 378 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 ATP5A1P25705 553 aaKnown RBP11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 FCHO2Q0JRZ9 810 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 LMAN2Q12907 356 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 CHIT1Q13231 466 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 SP140Q13342 867 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 LACTB2Q53H82 288 aaPredicted RBP11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 IKBIPQ70UQ0 350 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 C8orf59Q8N0T1 100 aaPredicted RBP11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 IPPKQ9H8X2 491 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 REEP1Q9H902 201 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 PNPLA3Q9NST1 481 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 SERTAD3Q9UJW9 196 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 PCDHB3Q9Y5E6 796 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 AGRPO00253 132 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 RFXANKO14593 260 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 ATP6V1G1O75348 118 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 POP7O75817 140 aaKnown RBP11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 PAPSS2O95340 614 aaPredicted RBP11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 NT5EP21589 574 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 HRH2P25021 359 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 ALDH4A1P30038 563 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 PRR5P85299 388 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 CYP1B1Q16678 543 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 TTC23Q5W5X9 447 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC8B1Q6J4K2 584 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 LYSMD3Q7Z3D4 306 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 CUZD1Q86UP6 607 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 ADHFE1Q8IWW8 467 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 SCML4Q8N228 414 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 VN1R2Q8NFZ6 395 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 CDKN2AIPNLQ96HQ2 116 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 TPD52L3Q96J77 140 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 FEM1AQ9BSK4 669 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 SMG9Q9H0W8 520 aaKnown RBP11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 HHATLQ9HCP6 504 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 SIRPGQ9P1W8 387 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 MYH13Q9UKX3 1938 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 PAPPA2Q9BXP8 1791 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 DPPA5A6NC42 116 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 GRID2O43424 1007 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 SHBGP04278 402 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 JMJD7P0C870 316 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 EPCAMP16422 314 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 HOXC13P31276 330 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC25A3Q00325 362 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 FOLH1Q04609 750 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 TOP3AQ13472 1001 aaPredicted RBP11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 ZNF846Q147U1 533 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 TYW3Q6IPR3 259 aaKnown RBP11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 ERICH5Q6P6B1 374 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 IQCKQ8N0W5 287 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 GJD3Q8N144 294 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 FIBINQ8TAL6 211 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 MRPL38Q96DV4 380 aaKnown RBP11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 ZDHHC12Q96GR4 267 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 ABCG8Q9H221 673 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 MRM3Q9HC36 420 aaKnown RBP11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 HPS4Q9NQG7 708 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 PCDHGA2Q9Y5H1 932 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 CCDC162PA2VCL2 907 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 TRIM43BA6NCK2 446 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 MATN2O00339 956 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms