RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TMTC4Q5T4D3 741 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 TSTD2Q5T7W7 516 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 ATP1A1-AS1Q5TC04 95 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 CYB5D1Q6P9G0 228 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 BORAQ6PGQ7 559 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 AFTPHQ6ULP2 937 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 PRICKLE2Q7Z3G6 844 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 ACVR1CQ8NER5 493 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 UBE2Q2Q8WVN8 375 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 ZFPM2Q8WW38 1151 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 STARD8Q92502 1023 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 TFGQ92734 400 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-225ENST00000533704 SLC45A3Q96JT2 553 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 SLC41A2Q96JW4 573 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 NRTNQ99748 197 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 FAM117AQ9C073 453 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 OR52A5Q9H2C5 316 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 XKR8Q9H6D3 395 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 FGF21Q9NSA1 209 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 CROTQ9UKG9 612 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 TCAF1Q9Y4C2 921 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 SLC9B1P1A6NJY1 282 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 B8ZZF3 427 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 PYCARD-AS1I3L0S3 204 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 SLC28A2O43868 658 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 OR1I1O60431 355 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 ZIC2O95409 532 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-225ENST00000533704 TIAF1O95411 115 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 ZBTB11O95625 1053 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-225ENST00000533704 OR56A5P0C7T3 313 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 F8A1P23610 371 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 OAS2P29728 719 aaKnown RBP10.15□□□□□ -0.78
CAPN1-225ENST00000533704 CCR10P46092 362 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 VPS41P49754 854 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 CRADDP78560 199 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 MC1RQ01726 317 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 RPA4Q13156 261 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 MAP7Q14244 749 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.15□□□□□ -0.78
CAPN1-225ENST00000533704 FASTKD1Q53R41 847 aaKnown RBP10.15□□□□□ -0.78
CAPN1-225ENST00000533704 PWWP2BQ6NUJ5 590 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 LDB1Q86U70 411 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-225ENST00000533704 KMT5CQ86Y97 462 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 TMEM126BQ8IUX1 230 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 OTUD6BQ8N6M0 293 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 TRIM58Q8NG06 486 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 OR52E1Q8NGJ3 308 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 OR13J1Q8NGT2 312 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 OR4L1Q8NH43 312 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 MAIP1Q8WWC4 291 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 ZNF778Q96MU6 729 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 TTC1Q99614 292 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 TLR10Q9BXR5 811 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 KLHL25Q9H0H3 589 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 MVB12BQ9H7P6 319 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 CASS4Q9NQ75 786 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 ASF1AQ9Y294 204 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 PPP2R2CQ9Y2T4 447 aa10.15□□□□□ -0.78
CAPN1-225ENST00000533704 TDRKHQ9Y2W6 561 aaKnown RBP10.15□□□□□ -0.78
CAPN1-225ENST00000533704 F8W8V4 182 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 QSOX1O00391 747 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 BTN3A3O00478 584 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 BTN3A1O00481 513 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 LIN7AO14910 233 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-225ENST00000533704 MAP3K7O43318 606 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 MT-ND3P03897 115 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 GSTM1P09488 218 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 SFTPCP11686 197 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 PVRP15151 417 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 CD151P48509 253 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 POLE2P56282 527 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 GSTM4Q03013 218 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 DNASE1L3Q13609 305 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 ERV3-1Q14264 604 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 SEMA3AQ14563 771 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 TRIP13Q15645 432 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-225ENST00000533704 ZNF658BQ4V348 819 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-225ENST00000533704 LYPLAL1Q5VWZ2 237 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 PACS1Q6VY07 963 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 NLRP9Q7RTR0 991 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 HOOK3Q86VS8 718 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 AMIGO1Q86WK6 493 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 D2HGDHQ8N465 521 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 OR5AR1Q8NGP9 310 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 CT55Q8WUE5 264 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 CATSPER2Q96P56 530 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 RANBP9Q96S59 729 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 FANCEQ9HB96 536 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 CHRAC1Q9NRG0 131 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 CATSPERZQ9NTU4 200 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 SEMA5BQ9P283 1151 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 ANAPC5Q9UJX4 755 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 POMT2Q9UKY4 750 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 PADI1Q9ULC6 663 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 TTC7AQ9ULT0 858 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-225ENST00000533704 PLAGL1Q9UM63 463 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 DRG1Q9Y295 367 aaKnown RBP10.14□□□□□ -0.79
CAPN1-225ENST00000533704 PCDHB3Q9Y5E6 796 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 PCM1Q15154 2024 aa10.14□□□□□ -0.79
CAPN1-225ENST00000533704 TNRC6AQ8NDV7 1962 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms