RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 IGHV5-10-1A0A0J9YXX1 117 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 CCDC189A1A4V9 331 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 MROH6A6NGR9 719 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 HTRA2O43464 458 aaPredicted RBP5.89□□□□□ -1.47
SOX6-216ENST00000533658 RNF8O76064 485 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 PGLSO95336 258 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 CLDN7O95471 211 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 FAM228BP0C875 321 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 FGF3P11487 239 aaPredicted RBP5.89□□□□□ -1.47
SOX6-216ENST00000533658 GP1BBP13224 206 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 CCNB1P14635 433 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 CD1CP29017 333 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 TRIM23P36406 574 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 ANP32AP39687 249 aaKnown RBP5.89□□□□□ -1.47
SOX6-216ENST00000533658 ADCY8P40145 1251 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 ACTR1BP42025 376 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 MMP13P45452 471 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 MAPK9P45984 424 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 BLKP51451 505 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 CDH6P55285 790 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 TAS2R40P59535 323 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 ACTR1AP61163 376 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 CDK3Q00526 305 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 SLC25A11Q02978 314 aaKnown RBP5.89□□□□□ -1.47
SOX6-216ENST00000533658 GBE1Q04446 702 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 ZFP36L1Q07352 338 aaKnown RBP5.89□□□□□ -1.47
SOX6-216ENST00000533658 NFATC2Q13469 925 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 KRT81Q14533 505 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 IQCB1Q15051 598 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 ZRSR2Q15696 482 aaKnown RBP5.89□□□□□ -1.47
SOX6-216ENST00000533658 CR1LQ2VPA4 569 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 ATP1A1-AS1Q5TC04 95 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 LRRC66Q68CR7 880 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 DENND5AQ6IQ26 1287 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 TMCO3Q6UWJ1 677 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 PTRH1Q86Y79 214 aaKnown RBP5.89□□□□□ -1.47
SOX6-216ENST00000533658 NAGSQ8N159 534 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 ATPAF2Q8N5M1 289 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 NAT14Q8WUY8 206 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 PIH1D2Q8WWB5 315 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 ART4Q93070 314 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 DTD2Q96FN9 168 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 C1orf159Q96HA4 380 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 GBP4Q96PP9 640 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 NUDCD1Q96RS6 583 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 TUBGCP5Q96RT8 1024 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 SEMA3CQ99985 751 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 RIOK2Q9BVS4 552 aaKnown RBP5.89□□□□□ -1.47
SOX6-216ENST00000533658 NUP85Q9BW27 656 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 FRMD8Q9BZ67 464 aaPredicted RBP5.89□□□□□ -1.47
SOX6-216ENST00000533658 OCIAD1Q9NX40 245 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 AIPL1Q9NZN9 384 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 NCKIPSDQ9NZQ3 722 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 ANAPC7Q9UJX3 599 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 KCNK6Q9Y257 313 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 HYOU1Q9Y4L1 999 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 PCDHGA7Q9Y5G6 932 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 DGKBQ9Y6T7 804 aa5.89□□□□□ -1.47
SOX6-216ENST00000533658 TRAV20A0A0B4J274 112 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 CXorf51AA0A1B0GTR3 108 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 TCRBV5S2A0A599 114 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 SYCE3A1L190 88 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 CLEC18AA5D8T8 446 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 RHPN2P1A8MT19 583 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 ALG1L2C9J202 215 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 KCNK1O00180 336 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 PRODHO43272 600 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 DUX1O43812 170 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 DLX3O60479 287 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 SNX2O60749 519 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 PPFIA2O75334 1257 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 MTX2O75431 263 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 ASMTLO95671 621 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 SERPINC1P01008 464 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 PRLP01236 227 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 HLA-DQB2P05538 268 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 MYCLP1P12525 358 aaPredicted RBP5.88□□□□□ -1.47
SOX6-216ENST00000533658 TNNT1P13805 278 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 CCKBRP32239 447 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 GPR1P46091 355 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 CSNK1DP48730 415 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 EPHB1P54762 984 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 AIF1P55008 147 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 AP1S1P61966 158 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 NSUN2Q08J23 767 aaKnown RBP eCLIP5.88□□□□□ -1.47
SOX6-216ENST00000533658 SLC10A2Q12908 348 aaPredicted RBP5.88□□□□□ -1.47
SOX6-216ENST00000533658 DPYSL3Q14195 570 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 GALNT3Q14435 633 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 NOMO1Q15155 1222 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 DPYSL2Q16555 572 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 TBR1Q16650 682 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 ARMC12Q5T9G4 340 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 MARC1Q5VT66 337 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 ALS2CLQ60I27 953 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 NCBP2-AS2Q69YL0 99 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 LVRNQ6Q4G3 990 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 CLEC18BQ6UXF7 455 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 NPNTQ6UXI9 565 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 TECPR1Q7Z6L1 1165 aa5.88□□□□□ -1.47
SOX6-216ENST00000533658 PIM3Q86V86 326 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms