RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 TTC9BQ8N6N2 239 aa12.05□□□□□ -0.48
BDNF-218ENST00000533246 CLP1Q92989 425 aaKnown RBP12.05□□□□□ -0.48
BDNF-218ENST00000533246 GPR62Q9BZJ7 368 aa12.05□□□□□ -0.48
BDNF-218ENST00000533246 ADAMTS5Q9UNA0 930 aa12.05□□□□□ -0.48
BDNF-218ENST00000533246 SAP18O00422 153 aaKnown RBP12.04□□□□□ -0.48
BDNF-218ENST00000533246 EI24O14681 340 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 NPPAP01160 153 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 C8AP07357 584 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 CHRM5P08912 532 aaPredicted RBP12.04□□□□□ -0.48
BDNF-218ENST00000533246 MAPKAPK2P49137 400 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 SLC11A1P49279 550 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 DIO3P55073 304 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 CACNG1Q06432 222 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 PUDPQ08623 228 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 PAGE2BQ5JRK9 111 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 ADGRF1Q5T601 910 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 VASH1Q7L8A9 365 aaPredicted RBP12.04□□□□□ -0.48
BDNF-218ENST00000533246 HIPK1Q86Z02 1210 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 LIX1Q8N485 282 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 NATD1Q8N6N6 113 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 CXorf40AQ8TE69 158 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 PHF10Q8WUB8 498 aaKnown RBP12.04□□□□□ -0.48
BDNF-218ENST00000533246 NSUN5Q96P11 429 aaKnown RBP12.04□□□□□ -0.48
BDNF-218ENST00000533246 PKP2Q99959 881 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 NLNQ9BYT8 704 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 GPSM3Q9Y4H4 160 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 MYH7BA7E2Y1 1941 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 PHRF1Q9P1Y6 1649 aaKnown RBP12.04□□□□□ -0.48
BDNF-218ENST00000533246 ISM1B1AKI9 464 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 H3BUI4 141 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 NPHS1O60500 1241 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 CLDN7O95471 211 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 UROSP10746 265 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 HPGDP15428 266 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 IMPDH1P20839 514 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 AGTR2P50052 363 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 NCF4Q15080 339 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 LRRTM3Q86VH5 581 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 PHC2Q8IXK0 858 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 XAGE5Q8WWM1 108 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 KLK6Q92876 244 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 HERC2P3Q9BVR0 1158 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 TMLHEQ9NVH6 421 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 KCTD5Q9NXV2 234 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 GJB5O95377 273 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 ALOX5P09917 674 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 NR2F1P10589 423 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 INO80DQ53TQ3 878 aaPredicted RBP12.04□□□□□ -0.48
BDNF-218ENST00000533246 CEP97Q8IW35 865 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 ATL1Q8WXF7 558 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 GATA6Q92908 595 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 PHF21AQ96BD5 680 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 PTPN18Q99952 460 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 NSUN3Q9H649 340 aaKnown RBP12.04□□□□□ -0.48
BDNF-218ENST00000533246 KLHL28Q9NXS3 571 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 OAZ3Q9UMX2 235 aa12.04□□□□□ -0.48
BDNF-218ENST00000533246 MYO5AQ9Y4I1 1855 aaKnown RBP12.04□□□□□ -0.48
BDNF-218ENST00000533246 ELOVL7A1L3X0 281 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 KLF11O14901 512 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 GPR32O75388 356 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 NADKO95544 446 aaPredicted RBP12.03□□□□□ -0.48
BDNF-218ENST00000533246 RPS9P46781 194 aaKnown RBP12.03□□□□□ -0.48
BDNF-218ENST00000533246 ARSDP51689 593 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 RAB14P61106 215 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 MPPE1Q53F39 396 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 SFT2D3Q587I9 215 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 VANGL1Q8TAA9 524 aaPredicted RBP12.03□□□□□ -0.48
BDNF-218ENST00000533246 SLC47A1Q96FL8 570 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 CTPS2Q9NRF8 586 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 THG1LQ9NWX6 298 aaKnown RBP12.03□□□□□ -0.48
BDNF-218ENST00000533246 MOCS1Q9NZB8 636 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 MARCH4Q9P2E8 410 aaPredicted RBP12.03□□□□□ -0.48
BDNF-218ENST00000533246 IKZF3Q9UKT9 509 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 MAP4K5Q9Y4K4 846 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 OR1I1O60431 355 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 CLDN9O95484 217 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 ESR1P03372 595 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 AOC1P19801 751 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 HERVK_113P63132 956 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 C1DQ13901 141 aaKnown RBP12.03□□□□□ -0.48
BDNF-218ENST00000533246 ZFP69Q49AA0 526 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 CPTPQ5TA50 214 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 TRNP1Q6NT89 227 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 CYP20A1Q6UW02 462 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 ZFP28Q8NHY6 868 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 IGSF8Q969P0 613 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 ITCHQ96J02 903 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 ERVK-6Q9BXR3 956 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 NUAK2Q9H093 628 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 SMOC2Q9H3U7 446 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 PNPLA8Q9NP80 782 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 EQTNQ9NQ60 294 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 DNAJC11Q9NVH1 559 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 PCDH10Q9P2E7 1040 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 PCDHB1Q9Y5F3 818 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 ACTL7AQ9Y615 435 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 ANKRD66B4E2M5 251 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 ZW10O43264 779 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 OR10H3O60404 316 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 ANXA4P09525 319 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms