RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 MBD2Q9UBB5 411 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 POLKQ9UBT6 870 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 URB2Q14146 1524 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 KIF14Q15058 1648 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 ARHGEF35A5YM69 484 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 GABRR3A8MPY1 467 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 UBE2Q2LH0YL09 131 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 TRIM77I1YAP6 450 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 VPS26AO75436 327 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 OR5F1O95221 314 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 ATXN1LP0C7T5 689 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 ZNF888P0CJ79 500 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 ANXA7P20073 488 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 TUBG1P23258 451 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 RYKP34925 604 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 HSF2Q03933 536 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 TLE3Q04726 772 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 SEMA3BQ13214 749 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 TPD52L1Q16890 204 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 ZNF829Q3KNS6 432 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 ATP13A5Q4VNC0 1218 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 SERTAD4-AS1Q5TG53 156 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 BZW1Q7L1Q6 419 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 CDR2LQ86X02 465 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 CAMK1DQ8IU85 385 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 HACE1Q8IYU2 909 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 ZBTB2Q8N680 514 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 AMER2Q8N7J2 671 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 MINDY2Q8NBR6 621 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 FLAD1Q8NFF5 587 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 TMEM171Q8WVE6 324 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 RAD54LQ92698 747 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 LINGO1Q96FE5 620 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 TRMT61AQ96FX7 289 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 AJUBAQ96IF1 538 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 FAM213AQ9BRX8 229 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 PANK2Q9BZ23 570 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 NEK6Q9HC98 313 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 MMP25Q9NPA2 562 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 MKKSQ9NPJ1 570 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 ATP13A2Q9NQ11 1180 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 KLHL1Q9NR64 748 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 TUBG2Q9NRH3 451 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 SAE1Q9UBE0 346 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 ARPP21Q9UBL0 812 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 HMGXB4Q9UGU5 601 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 RAPGEFL1Q9UHV5 662 aa5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 ASTN2O75129 1339 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-222ENST00000531967 PIPSLA2A3N6 862 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 OR14I1A6ND48 311 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 OR2AG2A6NM03 316 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 GDF9O60383 454 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 ACSL4O60488 711 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 CSO75390 466 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 CLN5O75503 358 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 TOMM70O94826 608 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 WDR47O94967 919 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 LDLRP01130 860 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 APOA1P02647 267 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 CLTAP09496 248 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 PTNP21246 168 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 ITGB8P26012 769 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 HOXD9P28356 352 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 TKTP29401 623 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 UQCRC1P31930 480 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 CCT8P50990 548 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 SSTP61278 116 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 FOLH1Q04609 750 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 MTAPQ13126 283 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 BFSP2Q13515 415 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 ALKBH1Q13686 389 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 HERC3Q15034 1050 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 STILQ15468 1287 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 HNRNPA1L2Q32P51 320 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 ZNF385CQ66K41 422 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 CDPF1Q6NVV7 123 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 ZNF529Q6P280 563 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 ZNF852Q6ZMS4 543 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 MICALCLQ6ZW33 695 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 LDB1Q86U70 411 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 SLCO6A1Q86UG4 719 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 DMRTC2Q8IXT2 367 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 C10orf67Q8IYJ2 551 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 ASCC1Q8N9N2 400 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 IGDCC4Q8TDY8 1250 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 TRIB2Q92519 343 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 CELF1Q92879 486 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 RPL10LQ96L21 214 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 MRI1Q9BV20 369 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 FICDQ9BVA6 458 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 NSUN3Q9H649 340 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 MED20Q9H944 212 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 PCDH9Q9HC56 1237 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 NDUFA13Q9P0J0 144 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 DUSP13Q9UII6 198 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 HACL1Q9UJ83 578 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 TMEM184BQ9Y519 407 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 FAM237AA0A1B0GTK4 181 aa5.12□□□□□ -1.59
ECHDC1-222ENST00000531967 C17orf100A8MU93 164 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms