RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 OR5K3A6NET4 321 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 FAM187AA6NFU0 413 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 E7ESA3 106 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 H3BMM5 538 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 GOLGA8MH3BSY2 632 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 IFRD1O00458 451 aaPredicted RBP10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 KPNA5O15131 536 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 CAPN5O15484 640 aaPredicted RBP10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 TTI1O43156 1089 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 NDUFS3O75489 264 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 S1PR4O95977 384 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 JMJD7P0C870 316 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 SPTBP11277 2137 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 FGF3P11487 239 aaPredicted RBP10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 AMD1P17707 334 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 PGAM1P18669 254 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 CD82P27701 267 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 CCR7P32248 378 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 CSTF2P33240 577 aaKnown RBP eCLIP10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 RHDQ02161 417 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 C19orf57Q0VDD7 668 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 FRG1Q14331 258 aaKnown RBP10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 GBX1Q14549 363 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 MSS51Q4VC12 460 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 IZUMO3Q5VZ72 239 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 CASC4Q6P4E1 433 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 MAATS1Q7Z4T9 603 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 GALNT7Q86SF2 657 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 LDB1Q86U70 411 aaPredicted RBP10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 CNTN4Q8IWV2 1026 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 TBC1D21Q8IYX1 336 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 PDIK1LQ8N165 341 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 RCBTB1Q8NDN9 531 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 KLHL6Q8WZ60 621 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 ELMO1Q92556 727 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 RSC1A1Q92681 617 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 TFGQ92734 400 aaPredicted RBP10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 STAMBPL1Q96FJ0 436 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 ZDHHC12Q96GR4 267 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 SNF8Q96H20 258 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 KRT12Q99456 494 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 CD180Q99467 661 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 ERP44Q9BS26 406 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 DDA1Q9BW61 102 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 ZNF768Q9H5H4 540 aaKnown RBP10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 SIDT1Q9NXL6 827 aaKnown RBP10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 KLHL42Q9P2K6 505 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 GNPTGQ9UJJ9 305 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 TEX264Q9Y6I9 313 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 PCM1Q15154 2024 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 SNRNP200O75643 2136 aaKnown RBP10.52□□□□□ -0.72
GPATCH4-216ENST00000531900 ERVH48-1M5A8F1 160 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 MATN2O00339 956 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 CCL4P13236 92 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 TYRP1P17643 537 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 ATP5DP30049 168 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 SLC5A2P31639 672 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 ETV5P41161 510 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 PREPP48147 710 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 TERF1P54274 439 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 GFERP55789 205 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 RAB15P59190 212 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 MC2RQ01718 297 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 DHX9Q08211 1270 aaKnown RBP10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 VAC14Q08AM6 782 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 LONRF1Q17RB8 773 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 TAF1BQ53T94 588 aaPredicted RBP10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 DNAJC21Q5F1R6 531 aaKnown RBP10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 SPANXN3Q5MJ09 141 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 CTSL3PQ5NE16 218 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 PLEKHS1Q5SXH7 462 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 ARHGAP40Q5TG30 622 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 TMEM164Q5U3C3 297 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 STEAP4Q687X5 459 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 DTX1Q86Y01 620 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 KMT5CQ86Y97 462 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 BBOF1Q8ND07 529 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 OR5K2Q8NHB8 316 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 CALML6Q8TD86 181 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 UBXN4Q92575 508 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 ZNF669Q96BR6 464 aaPredicted RBP10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 TEFMQ96QE5 360 aaKnown RBP10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 TAAR9Q96RI9 348 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 TRIM56Q9BRZ2 755 aaKnown RBP10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 ZPBPQ9BS86 351 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 ASPSCR1Q9BZE9 553 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 SPRY4Q9C004 299 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 PLAC1Q9HBJ0 212 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 CPNE5Q9HCH3 593 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 HRASLS2Q9NWW9 162 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 WHRNQ9P202 907 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 POLG2Q9UHN1 485 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 CDC23Q9UJX2 597 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 CFAP20Q9Y6A4 193 aaKnown RBP10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 COMMD10Q9Y6G5 202 aa10.52□□□□□ -0.73
GPATCH4-216ENST00000531900 KALRNO60229 2985 aa10.51□□□□□ -0.73
GPATCH4-216ENST00000531900 BAHCC1Q9P281 2608 aa10.51□□□□□ -0.73
GPATCH4-216ENST00000531900 EFCAB8A8MWE9 144 aa10.51□□□□□ -0.73
GPATCH4-216ENST00000531900 C9orf172C9J069 976 aa10.51□□□□□ -0.73
GPATCH4-216ENST00000531900 GOLGA8KD6RF30 607 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms