RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 RBL1P28749 1068 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 HALP42357 657 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 ARL4DP49703 201 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 DR1Q01658 176 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 KLHL35Q6PF15 583 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 TMC3Q7Z5M5 1100 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 HPS6Q86YV9 775 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 TICAM1Q8IUC6 712 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 TMEM126BQ8IUX1 230 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 PNPLA2Q96AD5 504 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 TRIB3Q96RU7 358 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 TMEM121Q9BTD3 319 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 NEU2Q9Y3R4 380 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 ZNF711Q9Y462 761 aa17.6■□□□□ 0.41
SCN4B-205ENST00000531550 TLCD2A6NGC4 264 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 TTI1O43156 1089 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 TMEM63AO94886 807 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 AP1B1Q10567 949 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 TEX35Q5T0J7 233 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 TRAPPC5Q8IUR0 188 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 D2HGDHQ8N465 521 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 CD180Q99467 661 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 CHST8Q9H2A9 424 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 MAGEE1Q9HCI5 957 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 TMPRSS11EQ9UL52 423 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 G3BP2Q9UN86 482 aaKnown RBP17.59■□□□□ 0.41
SCN4B-205ENST00000531550 SNX7Q9UNH6 387 aa17.59■□□□□ 0.41
SCN4B-205ENST00000531550 RP1L1Q8IWN7 2480 aaPredicted RBP17.59■□□□□ 0.41
SCN4B-205ENST00000531550 HIVEP3Q5T1R4 2406 aa17.58■□□□□ 0.41
SCN4B-205ENST00000531550 UBA6A0AVT1 1052 aaPredicted RBP17.58■□□□□ 0.4
SCN4B-205ENST00000531550 C5orf60A6NFR6 353 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 KCNK1O00180 336 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 KCNN4O15554 427 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 BPIP17213 487 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 HSD11B2P80365 405 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 ZBTB17Q13105 803 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 PTK6Q13882 451 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 GTF2H3Q13889 308 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 PLCL1Q15111 1095 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 NR6A1Q15406 480 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 GPR19Q15760 415 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 C4orf22Q6V702 233 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 GSTA5Q7RTV2 222 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 CNTD1Q8N815 330 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 ENDOVQ8N8Q3 282 aaKnown RBP17.58■□□□□ 0.4
SCN4B-205ENST00000531550 SLC38A9Q8NBW4 561 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 MYRIPQ8NFW9 859 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 C19orf60Q96EN9 201 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 VPS35Q96QK1 796 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 VAT1Q99536 393 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 GPR63Q9BZJ6 419 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 C10orf88Q9H8K7 445 aa17.58■□□□□ 0.4
SCN4B-205ENST00000531550 DOPEY1Q5JWR5 2465 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 OR5K3A6NET4 321 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 A6NL46 340 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 BHMG1C9JSJ3 638 aaPredicted RBP17.57■□□□□ 0.4
SCN4B-205ENST00000531550 KRT14P02533 472 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 RAB40ALP0C0E4 278 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 GDF10P55107 478 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 ITGA1P56199 1179 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 IFI35P80217 286 aaPredicted RBP17.57■□□□□ 0.4
SCN4B-205ENST00000531550 TMEM115Q12893 351 aaPredicted RBP17.57■□□□□ 0.4
SCN4B-205ENST00000531550 PPP1R7Q15435 360 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 RPE65Q16518 533 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 P3H1Q32P28 736 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 FAM69BQ5VUD6 431 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 LCN10Q6JVE6 187 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 B4GALNT4Q76KP1 1039 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 CCDC89Q8N998 374 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 FAM71DQ8N9W8 422 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 GLIS1Q8NBF1 620 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 OR8K5Q8NH50 307 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 ZNF501Q96CX3 271 aaPredicted RBP17.57■□□□□ 0.4
SCN4B-205ENST00000531550 SNRNP40Q96DI7 357 aaKnown RBP17.57■□□□□ 0.4
SCN4B-205ENST00000531550 LRFN5Q96NI6 719 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 SMAD5Q99717 465 aaKnown RBP17.57■□□□□ 0.4
SCN4B-205ENST00000531550 ERP44Q9BS26 406 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 RAB17Q9H0T7 212 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 LATS2Q9NRM7 1088 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 GPR83Q9NYM4 423 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 TCFL5Q9UL49 500 aa17.57■□□□□ 0.4
SCN4B-205ENST00000531550 LRBAP50851 2863 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 CTIFO43310 598 aaKnown RBP17.56■□□□□ 0.4
SCN4B-205ENST00000531550 STK10O94804 968 aaKnown RBP17.56■□□□□ 0.4
SCN4B-205ENST00000531550 KLK3P07288 261 aaPredicted RBP17.56■□□□□ 0.4
SCN4B-205ENST00000531550 TNFRSF8P28908 595 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 DMPKQ09013 629 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 WASHC5Q12768 1159 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 ATP13A5Q4VNC0 1218 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 TEX44Q53QW1 395 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 PLEKHS1Q5SXH7 462 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 FAM182AQ5T1J6 154 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 PRAMEF17Q5VTA0 474 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 DSELQ8IZU8 1212 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 TTC30BQ8N4P2 665 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 GDAP1Q8TB36 358 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 C5orf34Q96MH7 638 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 NLNQ9BYT8 704 aa17.56■□□□□ 0.4
SCN4B-205ENST00000531550 DMGDHQ9UI17 866 aaKnown RBP17.56■□□□□ 0.4
SCN4B-205ENST00000531550 TRHDEQ9UKU6 1024 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms