RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 RABEPKQ7Z6M1 372 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 ARMC2Q8NEN0 867 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 RMDN2Q96LZ7 410 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 PAIP2Q9BPZ3 127 aaKnown RBP18.62■□□□□ 0.57
SMPD1-205ENST00000531303 DPEP2Q9H4A9 486 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 UTP6Q9NYH9 597 aaKnown RBP18.62■□□□□ 0.57
SMPD1-205ENST00000531303 NKIRAS1Q9NYS0 192 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 XPR1Q9UBH6 696 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 SPASTQ9UBP0 616 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 GPR179Q6PRD1 2367 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 TK2O00142 265 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 EIF3FO00303 357 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-205ENST00000531303 IFRD1O00458 451 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-205ENST00000531303 KCNC1P48547 511 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 ATP1A2P50993 1020 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 KPNA2P52292 529 aaKnown RBP18.61■□□□□ 0.57
SMPD1-205ENST00000531303 HNRNPKP61978 463 aaKnown RBP eCLIP18.61■□□□□ 0.57
SMPD1-205ENST00000531303 TECRLQ5HYJ1 363 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 LVRNQ6Q4G3 990 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 NEK10Q6ZWH5 1172 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 UBE2R2Q712K3 238 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-205ENST00000531303 PDZD3Q86UT5 571 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 LCA5Q86VQ0 697 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 PHC3Q8NDX5 983 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 ATOH1Q92858 354 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-205ENST00000531303 KIAA1191Q96A73 305 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 LOXL4Q96JB6 756 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 FOPNLQ96NB1 174 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 PRRX2Q99811 253 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 TFB2MQ9H5Q4 396 aaKnown RBP18.61■□□□□ 0.57
SMPD1-205ENST00000531303 ERVMER34-1Q9H9K5 563 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 FAM86C1Q9NVL1 165 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 TAAR2Q9P1P5 351 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 CIDEBQ9UHD4 219 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 RNF112Q9ULX5 631 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 SLC6A14Q9UN76 642 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 DOLKQ9UPQ8 538 aa18.61■□□□□ 0.57
SMPD1-205ENST00000531303 PRR19A6NJB7 356 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 PLIN3O60664 434 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 PROCP04070 461 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 RBP1P09455 135 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 BDKRB1P46663 353 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 BNIP3Q12983 259 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 CLCA4Q14CN2 919 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 ELOCQ15369 112 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 HLA-BQ31612 363 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 DUS1LQ6P1R4 473 aaKnown RBP18.6■□□□□ 0.57
SMPD1-205ENST00000531303 FAM46DQ8NEK8 389 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 STAG3L4Q8TBR4 150 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 ASB11Q8WXH4 323 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 TFGQ92734 400 aaPredicted RBP18.6■□□□□ 0.57
SMPD1-205ENST00000531303 C12orf66Q96MD2 445 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 INSM2Q96T92 566 aaPredicted RBP18.6■□□□□ 0.57
SMPD1-205ENST00000531303 ELF4Q99607 663 aaPredicted RBP18.6■□□□□ 0.57
SMPD1-205ENST00000531303 MRPL57Q9BQC6 102 aaKnown RBP18.6■□□□□ 0.57
SMPD1-205ENST00000531303 ZDHHC5Q9C0B5 715 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 CAPN10Q9HC96 672 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 IMP3Q9NV31 184 aaKnown RBP18.6■□□□□ 0.57
SMPD1-205ENST00000531303 UCKL1Q9NWZ5 548 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 SCHIP1Q9P0W5 487 aaPredicted RBP18.6■□□□□ 0.57
SMPD1-205ENST00000531303 GMEB2Q9UKD1 530 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 ASF1AQ9Y294 204 aa18.6■□□□□ 0.57
SMPD1-205ENST00000531303 KRT87PA6NCN2 255 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 OR52A4PA6NMU1 304 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 AQP9O43315 295 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 PIAS2O75928 621 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 ZWINTO95229 277 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 MATN4O95460 622 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 ACADLP28330 430 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 ARRB1P49407 418 aaPredicted RBP18.59■□□□□ 0.57
SMPD1-205ENST00000531303 PHKG1Q16816 387 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 UAP1L1Q3KQV9 507 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 CCDC153Q494R4 210 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 HHATQ5VTY9 493 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 LAIR1Q6GTX8 287 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 TCEAL6Q6IPX3 200 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 FRA10AC1Q70Z53 315 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 GPSM1Q86YR5 675 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 ZNF548Q8NEK5 533 aaPredicted RBP18.59■□□□□ 0.57
SMPD1-205ENST00000531303 OR2I1PQ8NGU4 316 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 DLG3Q92796 817 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 TCEAL3Q969E4 200 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 GTPBP2Q9BX10 602 aaKnown RBP18.59■□□□□ 0.57
SMPD1-205ENST00000531303 MRPL46Q9H2W6 279 aaKnown RBP18.59■□□□□ 0.57
SMPD1-205ENST00000531303 IL21RQ9HBE5 538 aa18.59■□□□□ 0.57
SMPD1-205ENST00000531303 WDR91A4D1P6 747 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 NCF1BA6NI72 391 aaPredicted RBP18.58■□□□□ 0.57
SMPD1-205ENST00000531303 NCF1CA8MVU1 366 aaPredicted RBP18.58■□□□□ 0.57
SMPD1-205ENST00000531303 SUPT3HB4E1H0 165 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 UBXN8O00124 270 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 TM9SF1O15321 606 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 SUPT3HO75486 399 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 GUCA1CO95843 209 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 C8GP07360 202 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 NCF1P14598 390 aaPredicted RBP18.58■□□□□ 0.57
SMPD1-205ENST00000531303 MAP4P27816 1152 aaKnown RBP18.58■□□□□ 0.57
SMPD1-205ENST00000531303 HALP42357 657 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 DEFB133Q30KQ1 61 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 CAPRIN2Q6IMN6 1127 aaKnown RBP18.58■□□□□ 0.57
SMPD1-205ENST00000531303 SLC23A3Q6PIS1 610 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms